| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2380 |
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| Symbol | |
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| ID | 3971552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2579701 |
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| End bp | 2583489 |
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| Gene Length | 3789 bp |
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| Protein Length | 1262 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925487 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_532252 |
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| Protein GI | 90423882 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG AACGGCGCTA CACCCAGGAC GGCCAGTCTC CCTATGCCGA AATCGCGTTT
CGGTTGACCA CCAGTGAGAT TCGCAATCCC GACGGGTCGG TGGTGTTCCG CCTCGAGAAT
GTCGAGGTGC CGGAGTTCTG GTCGCAGGTC GCCTCCGACG TGCTGGCGCA GAAGTATTTC
CGCAAGGCCG GCGTCGCCGC GCGCTTGAAG AAGGTCGAAG AAGAGACCGT GCCGTCGTGG
CTGTGGCGCT CGGTGCCCGA CACCGAGGCT TTGGCGCTGC TGCCGGAGAA CGAGCGCTTC
GTCAGCGAAT TGTCGTCCAA GCAGGTGTTC GACCGGCTCG CCGGCTGCTG GACCTATTGG
GGCTGGAAGG GCGACTACTT CTCCTCGGAA GACGACGCCC GCGCCTTCAA CGACGAACTG
CGCTACATGC TGGCCAAGCA GATGGTGGCG CCGAATTCGC CGCAATGGTT CAACACCGGG
CTGCATTGGG CCTACGGCGT CGACGGCCCC GGCCAGGGCC ATTTCTACGT CGACTGGAAG
ACCGGCAAGC TGACCAAGTC GAAGTCGGCC TATGAGCATC CGCAGCCGCA CGCCTGCTTC
ATCCAGGGCA TCCAGGACGA CCTCGTCAAC GAGGGCGGCA TCATGGACCT GTGGGTGCGT
GAAGCACGGC TGTTCAAGTA TGGCTCCGGC ACCGGTTCCA ACTTCTCGCG GCTGCGCGGC
GAAGGCGAAA AACTCTCCGG CGGCGGCCGC TCCTCCGGCC TGATGAGCTT CTTGAAGATC
GGCGACCGCG CCGCCGGCGC CATCAAGTCG GGTGGCACCA CGCGCCGCGC CGCCAAGATG
GTGGTGGTCG ACGCCGACCA TCCGGATATC GAGACCTATA TCGACTGGAA GGTGAAAGAG
GAGCAGAAGG TCGCCGCCCT CGTCACCGGC TCCAAGCTGA ACCAGAAGCA TCTGAAGGCC
GTGCTGAAGG CCTGCGTGAA TTGCGAAGGC TCCGGCGACG ACTGCTTCGA CCCGGAGAAG
AACCCGGCGC TGCGCCGCGA GATCAAGCTC GCCCGCCGCG CGCTGGTGCA GGACGCCATG
ATCAAGCGCG TCATCCAATA CGCCAAGCAA GGCTACAAGG AGATCGACTT CCCGACCTAC
GACACCGACT GGGATTCCGA GGCCTACCTC ACCGTGTCGG GGCAGAACTC CAACAACTCC
GTCTCGCTGA AGGACGATTT TCTGCGCGCG GTGGAGACCG ATGGCGACTG GAATCTGATC
GGCCGCACCA ACAAGAAGGT GATGAAGACG CTGAAGGCCC GCGACCTGTG GGAGAAGATC
GGCTACGCCG CTTGGGCCTC GGCCGATCCC GGGCTGCACT TCAACACCAC GATGAACGAC
TGGCACACCT GCAAGGCCTC GGGCGACATC CGCGCCTCGA ACCCCTGCTC GGAATACATG
TTCCTCGACG ACACCGCCTG CAACCTGGCC TCGGCCAACC TCTTGACGAT GTACGACACC
ACCACCAACC GCTTCGACGT CGATGCCTAT GAGCATCTGT GCCGGCTGTG GACCGTGGTG
CTGGAAGTCT CCGTGATGAT GGCGCAGTTT CCGTCAAAGC AGATCGCGGA ATTGTCCTAC
GAATTCCGCA CGCTGGGGCT CGGCTTCGCC AATATCGGCG GGCTGTTGAT GACCATGGGG
CTCAGCTACG ACTCCAAAGA AGGCCGCGCT TTGTGCGGCG CGCTCAGCGC GATCATGACC
GGCACCGCCT ATTCCACTTC GGCGGAGATG GCGCAGAAAC TCGGGCCGTT CCCCGGCTAC
AAGAAGAACG CCGGCCACAT GCTGCGGGTG ATCCGCAACC ATCGCCGCGC CGCGCACGGC
GAATCCCGCG GCTATGAGGG CCTTGCGGTC AATCCGGTGC CGCTCGATCA CGCCTCCTGC
CCGCAGGAGG ACGTCGTCAC CCACGCCAAG GCGGCCTGGG ACAAGGCGCT CGAACTCGGC
GAAGCCCACG GCTATCGCAA CGCCCAGACC ACCGTGGTGG CGCCGACCGG CACCATCGGC
CTGGTGATGG ATTGCGACAC CACCGGCATC GAGCCCGACT TCGCGCTGGT GAAATTCAAG
AAGCTCGCCG GCGGCGGCTA TTGGAAGATC ATCAACCGCG CGGTGCCCGC CGCCTTGCGC
ATCCTCGGCT ATCCGGAACA CCAGATCGCC GAGATCGAGG CCTACGCGGT CGGCCACGGC
TCGCTCTCCA ACGCCCCGGC GATCAACGTC GCCACGCTGA AGGCCAAGGG CTTCACCGAC
GAGGCCTTGA AGAAGGTCGA GGCCGCGCTG CCGACCGCCT TCGACATCAA ATTCGCCTTC
AACAAATGGA CTTTTGGCGA GGAGTTCCTG CACGACACGC TGAAGCTCGC GCCGGACCTG
ATCGCGGCGC CGAATTTCGA CCTGTTGGCC GCGATCGGCT TTTCCAAGCG CGAGATCGAG
GCCGCCAACA TCCACATCTG CGGCGCCATG ACCATCGAAG GCGCGCCGCA TCTGAAGGCC
GAGCACTACG CGGTGTTCGA TTGCGCCAAT CCCTGCGGCA AGGTCGGCAA GCGCTATCTG
TCGGTGGAAA GCCACATCCG CATGATGGCG GCGACGCAGC CGTTCATCTC CGGCGCGATC
TCCAAGACCA TCAACATGCC GAACGACGCC ACGGTGGACG ACTGCAAGTC GGCCTATCTG
CTGTCGTGGA AGCTCGCCTT GAAGGCCAAC GCGCTGTACC GCGACGGCTC GAAACTGTCG
CAGCCCTTGA ACTCGCAGCT GATCGCCGAC GAGGACGACG AGGACGACGG CATCGACGCC
TTCATGGAGA AGCCGATGGC GGCGCGCACC GCCGCGCTCT CCGAGAAGGT GGTGGAGCGG
CTGGTCGAGC GCATCGTGGT GATGCGCGAA CGCGAGAAGA TGCCGGACCG CCGCAAGGGC
TACACCCAGA AGGCGGTGGT CGGCGGCCAC AAGGTCTATC TGCGCACCGG CGAATATGAC
GATGGCCGGA TCGGCGAAAT CTTCATCGAC ATGCACAAGG AGGGCGCCGC CCTCCGGTCG
TTCATCAACA ATTTTGCGAT CGCGGTGTCC TTGGGCCTTC AGTATGGCGT GCCGCTGGAA
GAATATGTCG ACGCCTTCAC CTTCACCCGC TTCGAGCCCG CGGGCCCGGT GCAGGGCAAC
GACTCGATCA AGTACGCCAC CTCGATCCTC GACTACGTGT TCCGCGAACT CGCGGTGAGC
TACATGGGCC GCTTCGACCT CGCCCATGTC GACCCCCGCG AATCGCATTT CGACGCGCTC
GGCAAGGGCA TCGCCGAGGG CAAATCGCCG GAGCCGGCGC AGGCCAACAA GTACCTGTCG
AAGGGCCTGA CCCGCTCGCG CACCGACAAT CTGGTGGTGA TGCGGCAGGC GCCGGCCGCG
ACGCCGCCCG CCACCGGCGG CGAGACTGCG CGCAGCACGT CGACGGCGGG AGTGCACTCG
GTCACCGCGC TTGGCGGCAC CCAAGCCGCG CACGGCGCCC GCGTCGCCGA CACGCTGGAA
GGCGTCACCG CACTGAAGGC GGAAGCCGAC CACGACCTGT CGCCGACCGA AAAGCTGGAA
GCACTGCAGT GGAGCAAGGC CAACACCGCG CGCGAACAGG CCAAGCCGTC GAAATCCGAA
CGCCGCGCCG AAGCCAAGGC CAAAGGCTAC GAGGGCGAAA TGTGCGGCGA ATGCGGCCAC
TTCTCGCTGG TCCGCAACGG CACCTGCATG AAGTGCGACA CCTGTGGGGC GACCACGGGG
TGTAGTTGA
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| Protein sequence | MKIERRYTQD GQSPYAEIAF RLTTSEIRNP DGSVVFRLEN VEVPEFWSQV ASDVLAQKYF
RKAGVAARLK KVEEETVPSW LWRSVPDTEA LALLPENERF VSELSSKQVF DRLAGCWTYW
GWKGDYFSSE DDARAFNDEL RYMLAKQMVA PNSPQWFNTG LHWAYGVDGP GQGHFYVDWK
TGKLTKSKSA YEHPQPHACF IQGIQDDLVN EGGIMDLWVR EARLFKYGSG TGSNFSRLRG
EGEKLSGGGR SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VVVDADHPDI ETYIDWKVKE
EQKVAALVTG SKLNQKHLKA VLKACVNCEG SGDDCFDPEK NPALRREIKL ARRALVQDAM
IKRVIQYAKQ GYKEIDFPTY DTDWDSEAYL TVSGQNSNNS VSLKDDFLRA VETDGDWNLI
GRTNKKVMKT LKARDLWEKI GYAAWASADP GLHFNTTMND WHTCKASGDI RASNPCSEYM
FLDDTACNLA SANLLTMYDT TTNRFDVDAY EHLCRLWTVV LEVSVMMAQF PSKQIAELSY
EFRTLGLGFA NIGGLLMTMG LSYDSKEGRA LCGALSAIMT GTAYSTSAEM AQKLGPFPGY
KKNAGHMLRV IRNHRRAAHG ESRGYEGLAV NPVPLDHASC PQEDVVTHAK AAWDKALELG
EAHGYRNAQT TVVAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYWKI INRAVPAALR
ILGYPEHQIA EIEAYAVGHG SLSNAPAINV ATLKAKGFTD EALKKVEAAL PTAFDIKFAF
NKWTFGEEFL HDTLKLAPDL IAAPNFDLLA AIGFSKREIE AANIHICGAM TIEGAPHLKA
EHYAVFDCAN PCGKVGKRYL SVESHIRMMA ATQPFISGAI SKTINMPNDA TVDDCKSAYL
LSWKLALKAN ALYRDGSKLS QPLNSQLIAD EDDEDDGIDA FMEKPMAART AALSEKVVER
LVERIVVMRE REKMPDRRKG YTQKAVVGGH KVYLRTGEYD DGRIGEIFID MHKEGAALRS
FINNFAIAVS LGLQYGVPLE EYVDAFTFTR FEPAGPVQGN DSIKYATSIL DYVFRELAVS
YMGRFDLAHV DPRESHFDAL GKGIAEGKSP EPAQANKYLS KGLTRSRTDN LVVMRQAPAA
TPPATGGETA RSTSTAGVHS VTALGGTQAA HGARVADTLE GVTALKAEAD HDLSPTEKLE
ALQWSKANTA REQAKPSKSE RRAEAKAKGY EGEMCGECGH FSLVRNGTCM KCDTCGATTG
CS
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