| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2912 |
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| Symbol | |
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| ID | 4023413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3245979 |
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| End bp | 3249749 |
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| Gene Length | 3771 bp |
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| Protein Length | 1256 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963113 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_570041 |
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| Protein GI | 91977382 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.824334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.16669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG AGCGGCGCTA CACCACTGAC GGCCAGTCAC CCTATGCGGC GATTCAGTTC
CGGCTGACGA CGAGCGAGAT TCGCAATCCG GACGGCTCCG TGGTGTTCCG CCTCGAAAAT
GTCGAAGTGC CCGACTCGTG GTCGCAGGTC GCCTCCGACG TGCTGGCCCA GAAATATTTC
CGCAAGGCGG GCGTCGCTGC GCGCCTGAAG AAGGTCGAGG AAGAAACCGT GCCGTCGTGG
CTGTGGCGCT CGGTGCCCGA CACCGAGGCG CTCGCCACCC TGCCCGATAG CGAGCGCTTC
ACCAGCGAGC ATTCGTCCAA GCAGGTATTC GACCGCCTCG CCGGCTGCTG GACCTATTGG
GGCTGGAAGG GCGATTACTT CTCGTCCGAG GACGACGCCC GCGCGTTCTA CGACGAGCTG
CGCTACATGC TGGCGTCGCA GATGGTCGCG CCGAATTCGC CGCAATGGTT CAACACCGGC
CTGCATTGGG CTTACGGCGT CGACGGCCCC GGCCAGGGCC ACTATTACGT CGATCACAAG
ACCGGCAAGC TGACCAAGTC GAAATCCGCC TACGAGCATC CGCAGCCGCA CGCCTGCTTC
ATCCAGGGCA TCGAGGACGA CCTCGTCAAC GAGGGCGGCA TCATGGACCT GTGGGTGCGT
GAGGCGCGGC TGTTCAAATA CGGCTCCGGC ACCGGCTCCA ATTTCTCGCG GCTGCGCGGC
GAAGGCGAAC GCCTGTCCGG CGGCGGCCGC TCCTCCGGCC TGATGAGCTT CCTGAAGATC
GGCGACCGCG CCGCCGGCGC GATCAAGAGC GGCGGCACCA CGCGGCGCGC CGCCAAGATG
GTGGTGGTCG ACGCCGACCA TCCGGACATC GAGGCCTATA TCGACTGGAA GGTGAAGGAG
GAGCAGAAGG TCTCGGCTCT CGTCACCGGC TCCAAGCTCA ACCAGAAGCA CCTCAAGGCG
ATCCTGAAGG CCTGCGTCAA CTGCCAGGGC TCGGGCGACG ACTGCTTCGA CCCCGAGAAG
AACCCTGCCC TGCGCCGCGA GGTCAAGCTC GCGCGCCGCG CGCTGGTGAC TGACGCGATG
ATCAAGCGCG TCATCCAGTA CGCCAAGCAG GGCTACAAGG AGATCGACTT CCCGATCTAC
GACACCGACT GGGATTCGGA GGCCTACCTC ACCGTCTCCG GCCAGAACTC CAACAATTCG
GTCTCGCTGA AGGACGACTT CTTGCGCGCG GTGGAAACGG ATGGGGATTG GAACCTCACC
GGCCGCACCA CCAAGAAGGT GATGAAGACG CTGAAGGCCC GCGATCTGTG GGAGAAGATC
GGCTACGCCG CCTGGGCCAG CGCCGATCCC GGCCTGCACT TCAACACCAC GATGAACGAC
TGGCACACCT GCAAGGCCTC GGGCGACATC CGGGCCAGCA ATCCGTGCTC GGAATACATG
TTCCTGGACG ACACCGCCTG CAACCTCGCC TCGGCCAACC TGCTGACCTT CTACGACACC
ACGGCGAACG TGTTCGACCT CGGCGCCTAT GAGCATCTGT GCCGGCTGTG GACCGTCGTG
CTCGAGATCT CGGTACTGAT GGCGCAGTTT CCGTCGAAGC AGATCGCCGA GCTGTCTTAC
GAGTTCCGCA CCCTCGGCCT CGGCTTCGCC AATATCGGCG GCCTGCTGAT GACCATGGGC
CTCAGCTACG ACTCCAAGGA AGGCCGCGCG CTGTGCGGCG CGCTGTCGGC GATCATGACC
GGCGTGTCGT ATGCGACGTC GGCCGAGATG GCGGCGAAGC TCGGCCCGTT CCCCGGCTAC
AAGAAGAACG CCGCGCACAT GCTGCGGGTG ATCCGCAATC ACCGCCGCGC CGCCCACGGC
GAAAGCCGCG GCTATGAGGC GCTGTCGGTC GCCCCTGTCC CGCTCGACCA CGCCGGCTGC
CCGATCCCCG AAGCGATCAC GCACGCCAAG GCGGCGTGGG ACAGAGCGCT CGAACTCGGC
GAACTGCACG GCTATCGCAA CGCGCAGGTT TCGGTGGTCG CGCCGACCGG CACGATCGGC
CTGGTGATGG ATTGCGACAC CACCGGCATC GAGCCCGACT TCGCGCTGGT GAAGTTCAAG
AAGCTCGCCG GCGGCGGCTA CTGGAAGATC ATCAACCGCG CCGTGCCCGC CGCCTTGCGC
ATCCTCGGCT ATCCGGAAAA CCAGATCGCC GAGATCGAGG CCTATGCGGT CGGCCACGGC
TCGCTGTCCA ACGCGCCGGC GATCAACCAT TCGACCCTCA AGGCGAAGGG CTTCACCGAC
GAAGCGCTGG CCAAGGTCGA GGCGGCGCTG CCGACCGCCT TCGACATCAA ATTCGCCTTC
AACAAATGGA CGTTCGGCGA GGACTTCCTG CGCCAGACCC TGAAGATCGA GGCCGACGCG
ATCGCCGCGC CGAACTTCGA CCTGCTCGCC GCGCTCGGCT TCTCCAAGCG CGAGATCGAG
GCCGCCAACA TCCACATCTG CGGCGCGATG ACCGTGGAAG GCGCGCCGCA TCTGAAGGCG
GATCACTACG CGGTGTTCGA TTGCGCCAAT CCCTGCGGCA AGATCGGCAA GCGCTATCTG
TCGGTCGAGA GCCACATCCG GATGATGGCG GCGGCGCAGC CGTTCATCTC GGGCGCGATC
TCCAAGACCA TCAACATGCC GAACGACGCC ACGGTGGAGG ACTGCAAGTC CGCCTACATG
CTGTCGTGGA AGCTCGCGCT GAAGGCCAAC GCGCTGTATC GCGACGGCTC GAAGCTGTCG
CAGCCGCTGT CGTCGCAACT GATCTCCGAC GACGACGAGG ATGATGATGC GCTCGACGCC
TTCCTGGAGA AGCCGATGGC GGCGCGCGCC GCCCACGTCT CCGAGAAGGT GGTGGAGCGT
CTGGTCGAGC GCATCGTGGT GATGCGCGAG CGCGAGCGGA TGCCGGATCG CCGCAAGGGC
TACACCCAGA AGGCGGTGGT CGGCGGCCAC AAGGTCTATC TGCGCACCGG CGAATATGAC
GACGGCCGGA TCGGCGAGAT CTTTATCGAC ATGCACAAAG AGGGCGCCGC CCTCCGGTCG
TTCATCAATA ATTTCGCGAT CGCGGTGTCG CTCGGCCTGC AATACGGCGT GCCGCTCGAG
GAATATGTCG ATGCCTTCAC CTTCACCCGC TTCGAGCCCG CGGGCCCGGT GCAGGGCAAC
GACTCGATCA AGTATGCCAC CTCGATCCTC GACTACGTGT TCCGCGAACT CGCGGTCAGC
TACATGGGCC GGTTCGACCT CGCCCATGTC GATCCGAGCG AGACCGGCTT CGACGCCATC
GGCAAGGGCG TCGACGAAGG CAAGGCGCCG GAAGGCACGC CGTCGAGCCA CGCCGCGACC
AAATATCTGT CGAAGGGCCT GACCCGCTCG CGCACCGATA ATCTGGTGGT GATGCGCGGC
GTGCCGGCCT CGCCCGACAG CGGCTCGGCT CCGGTCAAGA TGGCCTACTC CCAGCCGGAG
ACCCACGCCA AGTCGACCTC CCGCATCGGC GACGTCCTCG AAGGCGCCAC CGCGCTGAAG
CAGGAAGTCC AGACCGATCT GTCGCCGACC GAAAAGCTCG AAGCGCTGCA ATGGAGCAAG
GCCAACACCG CCGCCACGCA GCCCGCAGCC TCGAAAGCCG AACGTCGCGC CGAAGCCAAG
GCCCGCGGCT ACGAGGGCGA CAGCTGCGGC GAATGCGGCA ACTTCACGCT GGTGCGGAAC
GGGACGTGCA TGAAGTGTGA TACGTGCGGC AGCACGACGG GGTGTTCGTA A
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| Protein sequence | MKIERRYTTD GQSPYAAIQF RLTTSEIRNP DGSVVFRLEN VEVPDSWSQV ASDVLAQKYF
RKAGVAARLK KVEEETVPSW LWRSVPDTEA LATLPDSERF TSEHSSKQVF DRLAGCWTYW
GWKGDYFSSE DDARAFYDEL RYMLASQMVA PNSPQWFNTG LHWAYGVDGP GQGHYYVDHK
TGKLTKSKSA YEHPQPHACF IQGIEDDLVN EGGIMDLWVR EARLFKYGSG TGSNFSRLRG
EGERLSGGGR SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VVVDADHPDI EAYIDWKVKE
EQKVSALVTG SKLNQKHLKA ILKACVNCQG SGDDCFDPEK NPALRREVKL ARRALVTDAM
IKRVIQYAKQ GYKEIDFPIY DTDWDSEAYL TVSGQNSNNS VSLKDDFLRA VETDGDWNLT
GRTTKKVMKT LKARDLWEKI GYAAWASADP GLHFNTTMND WHTCKASGDI RASNPCSEYM
FLDDTACNLA SANLLTFYDT TANVFDLGAY EHLCRLWTVV LEISVLMAQF PSKQIAELSY
EFRTLGLGFA NIGGLLMTMG LSYDSKEGRA LCGALSAIMT GVSYATSAEM AAKLGPFPGY
KKNAAHMLRV IRNHRRAAHG ESRGYEALSV APVPLDHAGC PIPEAITHAK AAWDRALELG
ELHGYRNAQV SVVAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYWKI INRAVPAALR
ILGYPENQIA EIEAYAVGHG SLSNAPAINH STLKAKGFTD EALAKVEAAL PTAFDIKFAF
NKWTFGEDFL RQTLKIEADA IAAPNFDLLA ALGFSKREIE AANIHICGAM TVEGAPHLKA
DHYAVFDCAN PCGKIGKRYL SVESHIRMMA AAQPFISGAI SKTINMPNDA TVEDCKSAYM
LSWKLALKAN ALYRDGSKLS QPLSSQLISD DDEDDDALDA FLEKPMAARA AHVSEKVVER
LVERIVVMRE RERMPDRRKG YTQKAVVGGH KVYLRTGEYD DGRIGEIFID MHKEGAALRS
FINNFAIAVS LGLQYGVPLE EYVDAFTFTR FEPAGPVQGN DSIKYATSIL DYVFRELAVS
YMGRFDLAHV DPSETGFDAI GKGVDEGKAP EGTPSSHAAT KYLSKGLTRS RTDNLVVMRG
VPASPDSGSA PVKMAYSQPE THAKSTSRIG DVLEGATALK QEVQTDLSPT EKLEALQWSK
ANTAATQPAA SKAERRAEAK ARGYEGDSCG ECGNFTLVRN GTCMKCDTCG STTGCS
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