16 homologs were found in PanDaTox collection
for query gene MmarC6_R0040 on replicon NC_009975
Organism: Methanococcus maripaludis C6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009975  MmarC6_R0040  SRP RNA; RNA component of signal recognition particle  100 
 
 		 307 bp  609  9.999999999999999e-173  Methanococcus maripaludis C6  Archaea  normal  0.0420787  n/a   
 
 
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NC_009637  MmarC7_R0010  SRP RNA; RNA component of signal recognition particle  97.72 
 
 		 307 bp  553  1e-155  Methanococcus maripaludis C7  Archaea  normal  1  normal  1 
 
 
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NC_009135  MmarC5_R0004  SRP RNA; RNA component of signal recognition particle  96.09 
 
 		 307 bp  513  1e-144  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
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NC_009634  Mevan_R0013  SRP RNA; RNA component of signal recognition particle  86.84 
 
 		 307 bp  250  2e-64  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
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NC_008789  Hhal_R0005  SRP RNA  100 
 
 		 118 bp  54  0.00002  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_R0056  SRP RNA; RNA component of signal recognition particle  100 
 
 		 119 bp  54  0.00002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.654574  normal  0.0337609 
 
 
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NC_011761  AFE_1917  Bacterial signal recognition particle RNA  100 
 
 		 100 bp  54  0.00002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
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NC_011761  AFE_1918  sRNA  100 
 
 		 105 bp  54  0.00002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_R0042  SRP RNA; RNA component of signal recognition particle  100 
 
 		 118 bp  52  0.00009  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.332893  normal  0.55167 
 
 
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NC_007484  Noc_R0048  SRP RNA; RNA component of signal recognition  96.55 
 
 		 118 bp  50.1  0.0004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0970685  n/a   
 
 
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NC_013926  Aboo_R0005  SRP RNA; RNA component of signal recognition particle  96.55 
 
 		 307 bp  50.1  0.0004  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
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NC_011145  AnaeK_R0054  SRP RNA; RNA component of signal recognitionparti cle  91.67 
 
 		 109 bp  48.1  0.001  Anaeromyxobacter sp. K  Bacteria  normal  0.431855  n/a   
 
 
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NC_011891  A2cp1_R0054  SRP RNA; RNA component of signal recognitionparti cle  91.67 
 
 		 109 bp  48.1  0.001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0792921  n/a   
 
 
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NC_007912  Sde_R0021  SRP RNA; RNA component of signal recognitionparticle  91.43 
 
 		 110 bp  46.1  0.006  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
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NC_007963  Csal_R0046  SRP RNA; RNA component of signal recognition particle  91.43 
 
 		 118 bp  46.1  0.006  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
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NC_012560  Avin_65170  bacterial signal recognition particle RNA SRP_bact  96.3 
 
 		 98 bp  46.1  0.006  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
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