10 homologs were found in PanDaTox collection
for query gene MADE_02022 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_02022  zinc metalloproteinase Mpr protein  100 
 
 
184 aa  390  1e-108  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.203928  n/a   
 
 
-
 
NC_008752  Aave_2747  zinc metalloproteinase Mpr protein  34.24 
 
 
268 aa  116  1.9999999999999998e-25  Acidovorax citrulli AAC00-1  Bacteria  normal  0.234581  normal 
 
 
-
 
NC_007912  Sde_1969  zinc metalloproteinase Mpr protein  33.16 
 
 
282 aa  115  3e-25  Saccharophagus degradans 2-40  Bacteria  normal  0.558528  normal 
 
 
-
 
NC_008826  Mpe_B0345  zinc metalloproteinase Mpr protein  33.33 
 
 
306 aa  109  2.0000000000000002e-23  Methylibium petroleiphilum PM1  Bacteria  normal  0.22412  normal  0.306363 
 
 
-
 
NC_010002  Daci_3892  zinc metalloproteinase Mpr protein  34.95 
 
 
284 aa  108  4.0000000000000004e-23  Delftia acidovorans SPH-1  Bacteria  normal  0.472555  normal  0.0156155 
 
 
-
 
NC_009720  Xaut_0542  hypothetical protein  50.65 
 
 
225 aa  79  0.00000000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  0.23037  normal 
 
 
-
 
NC_009485  BBta_6567  hypothetical protein  48.1 
 
 
297 aa  76.3  0.0000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010679  Bphyt_7399  zinc metalloproteinase Mpr protein  29.24 
 
 
251 aa  75.1  0.0000000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010502  Mrad2831_6488  hypothetical protein  29.83 
 
 
244 aa  73.9  0.000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_009720  Xaut_0238  hypothetical protein  26.2 
 
 
264 aa  69.7  0.00000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  hitchhiker  0.00313979 
 
 
-
 
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