| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0345 |
|---|
| Symbol | |
|---|
| ID | 4787973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | - |
|---|
| Start bp | 298247 |
|---|
| End bp | 299167 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640092777 |
|---|
| Product | zinc metalloproteinase Mpr protein |
|---|
| Protein accession | YP_001023355 |
|---|
| Protein GI | 124262885 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.22412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.306363 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTCCG AACGAGCTGC GCTGCGCGCG ACCCAGGAGT GCTACGAAGA ACTGCAGCGC
GCCTATGACT TCTTCAACGA ACGTCTCTTC GACAACGAAC TGCCGGGCGC GCTCATCACG
ATGCAGCGAA CCGGCCGGTC GCTCGGCCAC TACTCCTCTG CCAGGTACGT GGATCGCAGC
GGCGCCAAGG CCGACGAGAT CAACATGAAC CCAGGCTACT TCGCCACCAG GCCGATCGAG
GACACGCTGT CGACGCTCGG TCACGAGATG ACACACCAGT GGCGGGAACA TGGGGGCAAC
CCGCCGCGGC GCTGCTATCA CGACAAGGAG TGGGCCGCCA AGATGAAGCA GATCGGCCTT
CACCCGAGCA GCACAGGCCG GCCTGGCGGC AAGGAAGTCG GCGAGAAGAT GTCGCACTAC
GTGCTGGCGG ACGGCCTGTT CATCCAGGCT TGCAAGGAGC TTCTGCGCAC CTCCTTCGGC
ATCGTCTGGT TCGATCGCTT CCCGATGGCC TGTCCGAAGG ACTTCGACTA CGCCAACGGC
GTGACTGTCA GCGTGCCGTC GAAGCCTGGC GCGCAGACGG ACGGGCCCAA GCAGGACGCA
GCCAGCCTCG AGCACGACGA TGCTGCGACC GATCAGGAAG AAGGGGCTTC GGACGGTGGC
GGCGAGACGG ACGGGGCTGA TGGGCAGGTC GTGAAGGTGC CAATGCTCTC GGCGCCGCCC
ATCGACGCCG GCCTGGACGT GGCGATGGTC GAGAGTGCCG AGGAGCGCGC GGGAGGCGCG
CCGGCCGGCG CTGCGACCAA GGCGAATGCC TCCAATCGCC TGAAGTACAC CTGCCCGGGC
TGCAAGACGA ACATCTGGGC CAAGCCCAAC ATCAACGTCG ACTGCGGCGA CTGCAGCGCG
CGCTTCACCG CGGGCGCCTG A
|
|---|
| Protein sequence | MKSERAALRA TQECYEELQR AYDFFNERLF DNELPGALIT MQRTGRSLGH YSSARYVDRS
GAKADEINMN PGYFATRPIE DTLSTLGHEM THQWREHGGN PPRRCYHDKE WAAKMKQIGL
HPSSTGRPGG KEVGEKMSHY VLADGLFIQA CKELLRTSFG IVWFDRFPMA CPKDFDYANG
VTVSVPSKPG AQTDGPKQDA ASLEHDDAAT DQEEGASDGG GETDGADGQV VKVPMLSAPP
IDAGLDVAMV ESAEERAGGA PAGAATKANA SNRLKYTCPG CKTNIWAKPN INVDCGDCSA
RFTAGA
|
|---|
| |