8 homologs were found in PanDaTox collection
for query gene Lcho_2933 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_2933  hypothetical protein  100 
 
 		 393 aa  778    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008825  Mpe_A2944  fimbrial biogenesis protein  27.68 
 
 		 362 aa  69.7  0.00000000009  Methylibium petroleiphilum PM1  Bacteria  normal  0.104726  normal  0.987031 
 
 
-
 
NC_013889  TK90_0216  hypothetical protein  30.83 
 
 		 551 aa  52  0.00002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.590946  normal  0.120433 
 
 
-
 
NC_009783  VIBHAR_01140  Tfp pilus assembly protein PilV  34.62 
 
 		 136 aa  51.6  0.00003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I0667  hypothetical protein  24.8 
 
 		 135 aa  50.1  0.00007  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_004284  type 4 fimbrial biogenesis protein PilV  28.23 
 
 		 137 aa  48.1  0.0002  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_1861  hypothetical protein  24.1 
 
 		 880 aa  44.3  0.004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_2886  type IV pilus modification protein PilV  29.35 
 
 		 182 aa  43.1  0.01  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.313421  n/a   
 
 
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