Gene VIBHAR_01140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01140 
Symbol 
ID5553719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1156519 
End bp1156929 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content45% 
IMG OID640906632 
ProductTfp pilus assembly protein PilV 
Protein accessionYP_001444357 
Protein GI156973450 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCTA AACAAAAAGG CTTTAGCTTA ATCGAGGTGC TGATTTCGTT TCTGCTGCTT 
GGTATTGGCG CACTTGGTTT AACTAAGCTA CAAATCTACA TGGAACGTGA ATCGGATTAC 
GCGATTCAAA GTATCGAGGC ACTGCGACTG GCCGAAAATC AACTTGAGTT GTTCCGCACT 
CGAGGTGCTT CTGAGGCAAT GTCTACTATG ACACCGGCCA GTTTCGCTGC TATTGCAACA 
GGATCTTCTG CTACTGGATC TTATATCGTT GAGTGGGAGG TGCCTGCAGC AACGATCTCC 
GGATCTCTCA AGACCATCAC GATAACTTCT AGCTGGAAAG ATAGGATGGG GGAAACGCAA 
TCGATTGAGC TAAAAACAAT GATTTCGCGT TACAGTGAGT TTGAAAACTA A
 
Protein sequence
MISKQKGFSL IEVLISFLLL GIGALGLTKL QIYMERESDY AIQSIEALRL AENQLELFRT 
RGASEAMSTM TPASFAAIAT GSSATGSYIV EWEVPAATIS GSLKTITITS SWKDRMGETQ 
SIELKTMISR YSEFEN