13 homologs were found in PanDaTox collection
for query gene Gura_3330 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_3330  hypothetical protein  100 
 
 
783 aa  1558    Geobacter uraniireducens Rf4  Bacteria  normal  0.0454731  n/a   
 
 
-
 
NC_007614  Nmul_A0150  spermidine synthase-like  38.56 
 
 
812 aa  462  1e-129  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4279  hypothetical protein  38.07 
 
 
818 aa  439  9.999999999999999e-123  Polaromonas sp. JS666  Bacteria  normal  normal  0.228503 
 
 
-
 
NC_008554  Sfum_2865  hypothetical protein  37.33 
 
 
819 aa  422  1e-116  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0368958  normal 
 
 
-
 
NC_009831  Ssed_2791  hypothetical protein  32.09 
 
 
806 aa  313  7.999999999999999e-84  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0453  hypothetical protein  30.58 
 
 
828 aa  292  2e-77  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4224  hypothetical protein  29.96 
 
 
821 aa  290  1e-76  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.965892 
 
 
-
 
NC_008554  Sfum_2180  hypothetical protein  26.51 
 
 
889 aa  271  2e-71  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.786018 
 
 
-
 
NC_011831  Cagg_0793  hypothetical protein  29.12 
 
 
827 aa  272  2e-71  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.526313  normal 
 
 
-
 
NC_010571  Oter_2931  hypothetical protein  27.29 
 
 
766 aa  95.1  5e-18  Opitutus terrae PB90-1  Bacteria  normal  0.0187375  normal 
 
 
-
 
NC_011891  A2cp1_2756  Spermine synthase  26.18 
 
 
1078 aa  53.1  0.00002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2661  Spermine synthase  25.97 
 
 
1078 aa  52  0.00004  Anaeromyxobacter sp. K  Bacteria  normal  0.530948  n/a   
 
 
-
 
NC_013595  Sros_3413  Spermidine synthase-like protein  31.69 
 
 
681 aa  46.6  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.730337  normal  0.555353 
 
 
-
 
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