| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4279 |
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| Symbol | |
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| ID | 4013042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4510430 |
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| End bp | 4512886 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637943931 |
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| Product | hypothetical protein |
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| Protein accession | YP_551069 |
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| Protein GI | 91790117 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.228503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGA CCTGGACACG CGAGCTTGCA CGTGGCGGGC CCGTCCCGCC GGTGATCGGC
GTGGCCCTGA TCTCGGCCGC CGCGCTGGCC TACGAAATCC TGCTGATGCG GTTGTTCTCC
ATCATCCTGT GGCACCACTT CGCCTACATG ATCATCAGCC TAGCGCTGCT CGGCTACGGC
GCCAGCGGCG CCGTGCTGAC CTTGGCGCAA CACGCCGTGC AGCGGCATTT TGCACCGCTG
TTCAGCGCGG CCGCCGCGGC GTTCGGAGTC AGCGCCATAG GCTGCTTTGT GCTGGCGCAG
CGCGTGCCGT TCAATCCGCT CGAAATCCTC TGGGACCCGC GCCAGCCGGT GTACCTGCTG
GCGGTCTACC TGCTGCTTCT GCTGCCCTTC CTGTTCGCCG GCGCCTGTGT GTGCATGGCC
TTGTCATGCT TTCGCGGCAA GGTGCCGCGC ATCTACAGCT TCGACATCCT GGGCGCCGGG
GCGGGCAGCC TGGGCGTCGT GGCCCTGCTG TTCGTGCTGT CGCCGGCGGA CACCCTGAAG
CTGATCGGGG CCTTGGGATG GGCCGCCGCG GCGGTGGCGT GGCTCGAATG CCGGGGTCCC
AGGCACTGGC GGCCGGCGGC CCTGCTGATG GTCATGGCCA ACCTGCCCTT GCTGTTGCCG
CCAGCCTGGG TGGCACCCGT CATGTCGCCG TACAAGGAGC TGTCGCAGAC CTTGCGCATT
CCCGAAACCC GGGTGGTCGA GCAACGATCG AGCCCGCTGG GCCTCGTCAG CGTGGTCGAG
AGTCCGCGCA TTGCGCTGCG CCACGCGCCG GGACTGAGCC TCAATGCAAC GGCCGAGCCG
CCGCCGCAAC TCGGGGTCTT CATCGACGGC GAAGGTCTCA ACGCGCTGAC CCGATTCGAC
GGGCGGCAGG GCAGCCTGGT CCATCTCGAC CAGATCAGCT CGGCACTGCC CTACCACCTG
CTGCGCCATC CGCGCGTGCT GGTACTGGGT GCCGGCGCCG GAGCCGACGT GCTGCAGGCC
TACCATCACG GCGCCAGCCA GATCGATGCG GTGGAGCTCA ACCCGCAGGT CGTCGATCTG
GTGCGGCGCC GGTTCGCGGA CTATGCCGGC GGCATCTATT CGAGAATCGC GCGCGTGCAT
GTGGCCGAGG CGCGCGGCTT CGTCGCGGCC AGCAAGGAGC GCTACGACCT CATCCACGTG
GCGCTGCTCG ACTCCTTCAG CGCTTCCTCG GCCGGCCTCT ACGCGCTAGC CGAAAACTAT
CTCTACACGG TCGAAGCCGT GCAGGACGAC CTGCGGCATC TGCAGCCCGG CGGCCTGCTG
GCGATCACAC GCTGGGTCAC GCTGCCGCCG CGCGATGCGC TCAAGCTCTT TGCCGCCGCC
GCGCTGGCGC TGGAGCGATC GGGCGTCGCC GATCCCGGAT CACGGCTCGC CCTGGTGCGC
AGCTGGAAGA CCACCACGCT GCTCGTCAAG AACGGCGCCT TCGACGGCGC GGACATCGCG
GCGATCAAGG CCTTCTGCGC CGCCCGCTCG TTCGATGTGG CTTACTACCC CGGCATGCGG
CCGGAGGAGG CGAACCGCTA TAACGTGGTC GAAGGTCCCG ACCTGTTCGA CGGCGCGGTG
GCGCTGCTCG GTCCGGGCCG GGAAGCATTC CTGCAGGGCT ACAAGTTTCA CATTGCCCCG
GCCACCGACG ACAAGCCGCA CTTCTTCCAC TTCTTCAAGT GGCGCTCGCT GCCCGAGCTC
TTGTCGCTGA AGGGGCAGGG CGGCTTGCCG CTCCTCGAAT GGGGCTATCC GGTGCTCGTG
GCGACGCTGG TTCAGGCGGT GCTTGCGAGC CTGCTGTTGA TCGGCCTGCC GTTGGCATGG
GTCACATGGG TAGATGCCCG GCAGGACCAC AGCACGCCGC TCACCGAATC GCGCGGCCGC
GTCCTCGTCT ACTTTCTGGC GATCGGTTTC GGCTTCATGT TCATCGAGAT TGCGTTCATC
CAGAAGTTCG TCCTGTTCCT GAGCCACCCG CTCCATGCGG TCGCGGTCGT GCTGTCCGCG
TTTTTGCTGT TCGCCGGAAT CGGCAGCCGC GTTTCCGGGC GCCTGGCAGA AGGCACCAGG
GCCATGCGGC ACCCGGCGGC AGTGGCGGGC GCCATTTGCC TGTCGGCGGT GCTTTGCCTG
GCCCTGCTTC CCTGGCTGTT CCGGCACGCG ATGGGGCTGC CGGACGCGGC GAGAATCCTG
ATCTCGGCCG CCCTCATCGC CCCGCTGGCG TTTTTCATGG GCATGCCGTT CCCCCTGGGT
TTGGCCAGGG TGGAGGCCAT CAATGCCCGG CTCATTCCCT GGGCTTGGGG TATCAACGGC
TGCGCGTCGG TCATCGGAGC GGTGCTGGCC ACGCTGTTCG CGATCCATGT CGGATTCACC
GCCGTGGTCA TGGCGGCGCT GGTTCTGTAT GGGGTTGCGG CGGCGACCCG TCCTTGA
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| Protein sequence | MPMTWTRELA RGGPVPPVIG VALISAAALA YEILLMRLFS IILWHHFAYM IISLALLGYG
ASGAVLTLAQ HAVQRHFAPL FSAAAAAFGV SAIGCFVLAQ RVPFNPLEIL WDPRQPVYLL
AVYLLLLLPF LFAGACVCMA LSCFRGKVPR IYSFDILGAG AGSLGVVALL FVLSPADTLK
LIGALGWAAA AVAWLECRGP RHWRPAALLM VMANLPLLLP PAWVAPVMSP YKELSQTLRI
PETRVVEQRS SPLGLVSVVE SPRIALRHAP GLSLNATAEP PPQLGVFIDG EGLNALTRFD
GRQGSLVHLD QISSALPYHL LRHPRVLVLG AGAGADVLQA YHHGASQIDA VELNPQVVDL
VRRRFADYAG GIYSRIARVH VAEARGFVAA SKERYDLIHV ALLDSFSASS AGLYALAENY
LYTVEAVQDD LRHLQPGGLL AITRWVTLPP RDALKLFAAA ALALERSGVA DPGSRLALVR
SWKTTTLLVK NGAFDGADIA AIKAFCAARS FDVAYYPGMR PEEANRYNVV EGPDLFDGAV
ALLGPGREAF LQGYKFHIAP ATDDKPHFFH FFKWRSLPEL LSLKGQGGLP LLEWGYPVLV
ATLVQAVLAS LLLIGLPLAW VTWVDARQDH STPLTESRGR VLVYFLAIGF GFMFIEIAFI
QKFVLFLSHP LHAVAVVLSA FLLFAGIGSR VSGRLAEGTR AMRHPAAVAG AICLSAVLCL
ALLPWLFRHA MGLPDAARIL ISAALIAPLA FFMGMPFPLG LARVEAINAR LIPWAWGING
CASVIGAVLA TLFAIHVGFT AVVMAALVLY GVAAATRP
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