13 homologs were found in PanDaTox collection
for query gene Gobs_2834 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_2834  peptidoglycan binding domain-containing protein  100 
 
 
166 aa  335  1.9999999999999998e-91  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0426204  n/a   
 
 
-
 
NC_013131  Caci_3179  Ricin B lectin  48.36 
 
 
331 aa  110  9e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.000170271 
 
 
-
 
NC_007777  Francci3_2988  peptidoglycan binding domain-containing protein  36.54 
 
 
249 aa  60.1  0.00000001  Frankia sp. CcI3  Bacteria  normal  normal  0.382188 
 
 
-
 
NC_009921  Franean1_3809  NLP/P60 protein  34.62 
 
 
496 aa  54.7  0.0000006  Frankia sp. EAN1pec  Bacteria  normal  0.100771  normal  0.247532 
 
 
-
 
NC_009921  Franean1_2508  peptidoglycan binding domain-containing protein  36.09 
 
 
256 aa  48.9  0.00003  Frankia sp. EAN1pec  Bacteria  normal  0.0275667  normal 
 
 
-
 
NC_011666  Msil_3084  Lytic transglycosylase catalytic  28.46 
 
 
623 aa  46.2  0.0002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007510  Bcep18194_A4498  lytic transglycosylase, catalytic  34.78 
 
 
404 aa  42.7  0.002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1337  lytic transglycosylase catalytic  34.78 
 
 
408 aa  42.7  0.002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.545884  normal  0.0328335 
 
 
-
 
NC_008542  Bcen2424_1355  lytic transglycosylase, catalytic  33.33 
 
 
408 aa  42.4  0.003  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0669029  n/a   
 
 
-
 
NC_008060  Bcen_0873  lytic transglycosylase, catalytic  34.78 
 
 
599 aa  41.6  0.005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_1239  lytic transglycosylase, catalytic  33.33 
 
 
404 aa  41.2  0.006  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4708  hypothetical protein  29.46 
 
 
888 aa  41.2  0.006  Nocardioides sp. JS614  Bacteria  decreased coverage  0.00825046  normal 
 
 
-
 
NC_010551  BamMC406_1265  lytic transglycosylase catalytic  33.33 
 
 
407 aa  41.2  0.006  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.254605 
 
 
-
 
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