| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0873 |
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| Symbol | |
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| ID | 4092293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 948473 |
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| End bp | 950272 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638014144 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_620755 |
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| Protein GI | 107022428 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGTC ATACCACTCG CCTGTTCGGC CGCCACTCGC TGCCCTTCGC CTCGACGATC
GCGCTCGCGT GCGCGCTCTG CGGCGTCGCG CGGGCAGATT GCCTGGACGA CGCGGCCGCG
TTCCAGCACG TGAGCGTCGC CCTGATGCGC GGCATCGCGC AAGTCGAATC GGGGATGAAT
CCGAACGCCG TCAACACGAA TACCAACGGC ACGGTCGACA TCGGGCTGAT GCAGATCAAC
AGCACGTGGC TGCCGACGCT CGCCCGCGAA GGCATCACAC GGGAAAGCCT GTTCGATGCG
TGCACGAACG CGTACGTCGG TGCGTGGATC CTGTCGCAGA ACATCCGCCA GCTCGGCCCC
AACTGGAACG CGATCGGCGC GTACAACTCC GCGTCGCCCG ACAAGCGCCT CGCCTATGCG
CGCAAGGTCT ATGATGCAAT CCGGACCATG CCGGATTCGC CGGATACTCC CATGCCCATC
CTTCCACCCT CCTTCACGCC GCCGCAACAG GCGCAGACGT ACAACCCGTT CGCGAGCCTG
AGCGTGTCGG CGCCGCCCGT CACGCGCGCA CGGACGATCT CGCCGGCCTC GCCGCCGGCG
CCGCCGCAGG GGGGCCCCGC CGGCCCGGCC GGTACGTACA ATTTCGGATG GACGGTCACC
GGCGCCGATC AGGCCAAGCC GACCCAGGTG TTCGACGACG GTGCGCGCGT CTACGTGCAG
TTCAGCGACA TGAAGCACGT GCCGGCGATC TTCACCGAGA CGTCGGCCGG GCGCGTGCTG
ATGTCGTGGG AGCTGCAGTT TCCCTATGCC GTCGTGACGC GTCCCGCGCA AACGTTGATC
TTCCAGCTCG GGCCGTTCGA AGCGCGCGCA GCGCAGTGCG GCGGCCGCAG GCATGACCGC
GCAGGCCGGG ACGGCCGGCA CGGCGACGGC CGGCGCATCG GCCCCGCCAT CGAGGAAGCC
GGCCGGTGCG GCAGCGAATG CCGCGACGAA CACGGCAGCC AATACGGCAG CGAAACGCAC
CGCCTCGGCC GATGCGCTGT GGTACGTGAA TACGCCGTCC ACGTCGGGAA CGGCGGCGGC
CTCGCCTTCG ACCGCGAATA TTCCTGCCAC GCTGCCGACG GCCATCACGT CGAACACGCC
GCCACTCGCG CCGGCTCAAG CACCGGCCGC GGCCGCTCAG CCGTCGCGCG CCAGCGCGGA
CGCGCTGTGG TACATCTCGA AGTAACGCGC GTCCGATCGC ACGCGCATCG CGGCGATCAT
TTCCGTGCGG TCAGCGGCAG TTCCGACGCG CCGGGCTTCA TGACATACCC GCGCAGATCG
CGCGACGTCG ACGATTCCGG TGACGCAATC GTCACACGGC CCTCACCCGC GCCGCACCCA
GATCACCTTG CCGTCGCGAA TGCCGAGATT GCGGCGCTCC TCGCGGTAGT CCATCGTGCC
CGGCAACGAC TTGCCGTCGC GCTCGAGCAC GCGCCACAGG CAGCCGTCGA GCAGCGCGGT
CGCATCGGCC TCGGTCTTGC CGACCAGCGC ATCGTCCGGT GCGGCGTCCG CCTTGCATGC
CTGCGCGGCG CCCGACTGCA GAGGGGGCCT GGCCGCGCCG CCCGCGGTGG CGTTGGGGTG
TTTCGTGTCC ATGTCCGCAC ATCCTGCAAA AGTTGCACTC GCAACGAGTG CAACGAGCAT
CGCGATCGTG TTCTTCATCG GTTTCTCCCT GTCGCGGGCC CGGCGGTCCA TGTGCGGCAC
TCGTGCACGA CCGGGCATCG CATGCGTGAT CGATTCCGCA CGCTGCCGGC CGTTTCCTGA
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| Protein sequence | MPRHTTRLFG RHSLPFASTI ALACALCGVA RADCLDDAAA FQHVSVALMR GIAQVESGMN
PNAVNTNTNG TVDIGLMQIN STWLPTLARE GITRESLFDA CTNAYVGAWI LSQNIRQLGP
NWNAIGAYNS ASPDKRLAYA RKVYDAIRTM PDSPDTPMPI LPPSFTPPQQ AQTYNPFASL
SVSAPPVTRA RTISPASPPA PPQGGPAGPA GTYNFGWTVT GADQAKPTQV FDDGARVYVQ
FSDMKHVPAI FTETSAGRVL MSWELQFPYA VVTRPAQTLI FQLGPFEARA AQCGGRRHDR
AGRDGRHGDG RRIGPAIEEA GRCGSECRDE HGSQYGSETH RLGRCAVVRE YAVHVGNGGG
LAFDREYSCH AADGHHVEHA ATRAGSSTGR GRSAVARQRG RAVVHLEVTR VRSHAHRGDH
FRAVSGSSDA PGFMTYPRRS RDVDDSGDAI VTRPSPAPHP DHLAVANAEI AALLAVVHRA
RQRLAVALEH APQAAVEQRG RIGLGLADQR IVRCGVRLAC LRGARLQRGP GRAARGGVGV
FRVHVRTSCK SCTRNECNEH RDRVLHRFLP VAGPAVHVRH SCTTGHRMRD RFRTLPAVS
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