Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2508 |
Symbol | |
ID | 5670904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2984743 |
End bp | 2985513 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641241425 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001506846 |
Protein GI | 158314338 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0275667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATG GAAAGCACCG CAGGTCCAGC CGTCCGAACA CCTCCGGACG GGGACCCGGG CGAGGCCGCG CCGCCGTGGT CACCGCGGCG AGCGTCATCG GCGCGTCGGC GGGACTGATG TTCACCGCGG GCCCGGCGAG CGCGGCCACC GTCTCCGACG TCACTATCGC GCAGGCAGCG CAGAACGCGG GCCTGCCGTC CTGCCGCGGG ATTCCGCTGA GCACCTGGGT CGCGGTGGCG CTGGCTGAGT CGGGCGGCAA CACAACGGCC CACGCGACGG TCGGTGAGGA CTCCCGCGGC CTCTGGCAGA TCAACATGCG CGCGCACTCG AGCTGGGTCG GTAGCCGCAA CCTCTACGAC CCGAACGTCA ACGCCTGGGC CGCGCGGCAG GTGTGCGCCA GCCAGGGCAT CGGTGCCTGG AGCGCCTACA AGAACGGCAT GCACGTGAAG TACCTGGCCC GCGGCGCCGC GGCGGCGGCC GCGGTGGGCG GCGGCACCGG CACCCGGACG ATCTCGGCCG TCACGCCGGC CGCGCCGGCC GCGCCGGCAC CGGCGCCCGC CAGCTCGGGC TATATGCGGC TCGGGGTCGA GGGCGTCCGC TGGGACGTGG CGCTGGTGCA GAAGCGGCTC GCCGACATCG GCTACCCGAT CACCGTCGAC GGCCGGTTCG GTCCGCAGAC CAACCACATG GTCGTCGACT TCCAGAAGAA GAACGGCCTC GTCCCGGACG GCGTCGTGGG CCCGCTCACC CACGACAGGC TGTTCGCCTG A
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Protein sequence | MSHGKHRRSS RPNTSGRGPG RGRAAVVTAA SVIGASAGLM FTAGPASAAT VSDVTIAQAA QNAGLPSCRG IPLSTWVAVA LAESGGNTTA HATVGEDSRG LWQINMRAHS SWVGSRNLYD PNVNAWAARQ VCASQGIGAW SAYKNGMHVK YLARGAAAAA AVGGGTGTRT ISAVTPAAPA APAPAPASSG YMRLGVEGVR WDVALVQKRL ADIGYPITVD GRFGPQTNHM VVDFQKKNGL VPDGVVGPLT HDRLFA
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