| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1239 |
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| Symbol | |
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| ID | 4309412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1352823 |
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| End bp | 1354037 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638149048 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_773131 |
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| Protein GI | 115351292 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGTC ATACTGCCCG TTCGATCAGC CACGCCACGC CGAAGATCGC CGCGACGATC
GCGCTGTCGT GCGCGCTGCA CGGAGCCGCG TGGGCCGATT GCCTCGACGA CGCAGCCACG
TTCCAGCACG TGAGCGTGAG CCTGTTGCGC GGCATCGCGC AGGTCGAATC GGGGATGAAT
CCGAACGCGA TCAACACGAA CACGAACGGC ACCGTCGACA TCGGCCTGAT GCAGATCAAC
AGCACCTGGC TGCCGACGCT CGCGCGCGAA GGCATCACGC GGGAAAGCCT GTTCGATGCG
TGCACCAACG CGTACGTCGG CGCGTGGATC CTGTCGCAGA ACATCCGCCA GCTCGGCGCC
AACTGGACCG CGATCGGCGC GTACAACGCC GCGTCGCCCG ACAAGCGCCT CGCGTATGCC
CGCAAGGTCT ATGATGCAAT CCGGACCATG CCGGATTCGC CGGATACTCC CATGCCCATC
CTGCCTCCTT CCTTTACGCC GCCGCAGCAG GTGCAGGCGT ACAACCCGTT CGCGAGCCTG
AGCGTATCCG CGCCGCCGGC CGCACGGGCC CGCACGCTGT CACCGGCCGC CCCGCCGCCG
CCGCAAGGCG GTCCCGCCGG CCCGGCCGGC ACGTACAACT TCGGCTGGAC CGTCACGGGC
GCCGACCAGG CCAAGCCGAC CCAGGTGTTC GACGACGGCG CGCGGATCTA CGTGCAGTTC
AGCGACATGA AGCATATGCC GGCGATCTTC ACCGAAACGT CGTCCGGCCG CGTGCTGATG
TCGTGGGAGC TGCAGTTCCC GTATGCCGTT CTGACGCGCC CCGCGCAAAC GTTGATCTTC
CAGCTCGGGC CGTTCGAGGC GCGCGCGCAG CGCGGCGCGG CGGGTGCAAC GACGCAGGCA
GGAGCTGGCG CGGCGGCGGG AGCATCACGT TCGGGGGCAA CGACGGCTGC CACGACGCCT
GCGGGGAAAC CGCACGCGAA TGCATCGGCC AAGCGCACGG CGTCGGCCGA CGCGCTGTGG
TATCTGAACA CGCCGTCGAC ATCGGGATCG GCAGCGACGG CGAATACCGC CCCAACGACA
ACCTCGTCGG CGTCGTCGAA CACGCCGGCC ACGTGGCCCA CCGCGGTGAC GTCGAATACG
CCGCCGCCGG CCGCCACACC TCAGGCGCCA GCCGCGCGCG TCAGCACCGA CGCGCTCTGG
TATATCTCGA AGTAA
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| Protein sequence | MPRHTARSIS HATPKIAATI ALSCALHGAA WADCLDDAAT FQHVSVSLLR GIAQVESGMN
PNAINTNTNG TVDIGLMQIN STWLPTLARE GITRESLFDA CTNAYVGAWI LSQNIRQLGA
NWTAIGAYNA ASPDKRLAYA RKVYDAIRTM PDSPDTPMPI LPPSFTPPQQ VQAYNPFASL
SVSAPPAARA RTLSPAAPPP PQGGPAGPAG TYNFGWTVTG ADQAKPTQVF DDGARIYVQF
SDMKHMPAIF TETSSGRVLM SWELQFPYAV LTRPAQTLIF QLGPFEARAQ RGAAGATTQA
GAGAAAGASR SGATTAATTP AGKPHANASA KRTASADALW YLNTPSTSGS AATANTAPTT
TSSASSNTPA TWPTAVTSNT PPPAATPQAP AARVSTDALW YISK
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