12 homologs were found in PanDaTox collection
for query gene Gbem_3787 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_3787  lipoprotein, putative  100 
 
 		 226 aa  451  1.0000000000000001e-126  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3871  lipoprotein, putative  89.38 
 
 		 225 aa  370  1e-102  Geobacter sp. M21  Bacteria  n/a    normal  0.873664 
 
 
-
 
NC_008609  Ppro_1808  putative lipoprotein  56.83 
 
 		 220 aa  244  9.999999999999999e-64  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00000000291865  n/a   
 
 
-
 
NC_002939  GSU3130  putative lipoprotein  56.83 
 
 		 220 aa  243  1.9999999999999999e-63  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0357  putative lipoprotein  56.39 
 
 		 219 aa  234  7e-61  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00000000000000581024  normal  1 
 
 
-
 
NC_007517  Gmet_0271  putative lipoprotein  41.81 
 
 		 220 aa  148  9e-35  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007484  Noc_0799  hypothetical protein  27.9 
 
 		 211 aa  57.4  0.0000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_0594  hypothetical protein  26.2 
 
 		 206 aa  53.1  0.000003  Pelobacter carbinolicus DSM 2380  Bacteria  decreased coverage  3.40048e-20  n/a   
 
 
-
 
NC_008340  Mlg_0868  hypothetical protein  25.59 
 
 		 205 aa  51.2  0.00001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013889  TK90_0763  hypothetical protein  26.81 
 
 		 210 aa  49.7  0.00004  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A2218  hypothetical protein  27.5 
 
 		 140 aa  49.3  0.00005  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_2452  hypothetical protein  26.67 
 
 		 230 aa  43.1  0.003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.289718  normal  0.470045 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>