| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2452 |
|---|
| Symbol | |
|---|
| ID | 6878450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2414407 |
|---|
| End bp | 2415099 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642790309 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002220854 |
|---|
| Protein GI | 198284533 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.289718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.470045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGGC AGGATTGGCT GAAAACGCAG GGCTGGCGCA GTGTGCTGGT ACTGGGGTTG
CTTATGGCGC TGTCCGCTTG TGTGACCGTC AACATTTACT TCCCGGCTGC AGCGGCACAG
AAGCTGGCGG ATCAGGTGGT CGGCGAGGTG TATAAGGCCG CCGCCAAAGG CGCCCTGCTG
GCTCCGGTTG CGCCCGCCGT ATCGGTACCC GCGCCGCCGG CGGCCCCCAC ACGGTCCGCA
GCCCCAGCCA GCAACGCCTT GAGCATGGCA TCCCCCTACC ATGCGGCCAG CTACCTGCTC
GCCATGGGCT TCTCCGCCAT CAGTGGCACG GCGGAGGCCG CCGCCAACCT CGATGCTTCC
AGCCCCGGAG TGCAGTCGGC CAGGGCGCAG CTCGAGGCGA TAGCGGCGCA GATGCGCCCT
TATTTTGTCA GCGGCGCCGT GGGTTTTACC GCCAATGGTC TGGTTGCTAT CCATGATGCC
GCGGCCGTGC CCCTGCAGCA GCGGGCGGCC CTGAATGGTC TTGTGAACAG CAATAACAGC
GCACTCAGCA ACCTCTACCA GCAGATCGCT GATGCCAATG GTCATCCCGA GTGGGAGGGT
CAAATTCAGC AGACGTTTGC CCAGGCCTGG ATCAACAAGG CACCGGCGGG ATATTGGTAT
CAGTCGCCCA GTGGTCAATG GCAGAAGAAA TAG
|
|---|
| Protein sequence | MTRQDWLKTQ GWRSVLVLGL LMALSACVTV NIYFPAAAAQ KLADQVVGEV YKAAAKGALL
APVAPAVSVP APPAAPTRSA APASNALSMA SPYHAASYLL AMGFSAISGT AEAAANLDAS
SPGVQSARAQ LEAIAAQMRP YFVSGAVGFT ANGLVAIHDA AAVPLQQRAA LNGLVNSNNS
ALSNLYQQIA DANGHPEWEG QIQQTFAQAW INKAPAGYWY QSPSGQWQKK
|
|---|
| |