10 homologs were found in PanDaTox collection
for query gene Franean1_7240 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_7240  putative RNA polymerase sigma factor  100 
 
 		 524 aa  969    Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00570923  normal  0.19325 
 
 
-
 
NC_007777  Francci3_0068  sigma-24  53.6 
 
 		 477 aa  209  1e-52  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_3454  ECF subfamily RNA polymerase sigma-24  39.02 
 
 		 568 aa  60.1  0.0000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.0741469  normal  1 
 
 
-
 
NC_013739  Cwoe_4272  RNA polymerase, sigma-24 subunit, ECF subfamily  33.33 
 
 		 666 aa  55.8  0.000002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.786099 
 
 
-
 
NC_013093  Amir_0062  RNA polymerase, sigma-24 subunit, ECF subfamily  33.53 
 
 		 489 aa  54.7  0.000004  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_7652  RNA polymerase, sigma-24 subunit, ECF subfamily  41.25 
 
 		 592 aa  53.9  0.000007  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_9182  RNA polymerase, sigma-24 subunit, ECF subfamily  34.15 
 
 		 628 aa  52.4  0.00002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5221  RNA polymerase, sigma-24 subunit, ECF subfamily  31.63 
 
 		 529 aa  48.5  0.0003  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4512  RNA polymerase, sigma-24 subunit, ECF subfamily  38.46 
 
 		 597 aa  48.1  0.0004  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0564894  n/a   
 
 
-
 
NC_007333  Tfu_2716  alanine-rich protein  31.86 
 
 		 344 aa  47.8  0.0005  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
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