17 homologs were found in PanDaTox collection
for query gene Franean1_3189 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_3189  hypothetical protein  100 
 
 
435 aa  879    Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3151  hypothetical protein  55.92 
 
 
433 aa  484  1e-135  Frankia sp. EAN1pec  Bacteria  normal  0.134749  normal 
 
 
-
 
NC_009921  Franean1_3247  hypothetical protein  59.35 
 
 
435 aa  456  1e-127  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4659  glycoside hydrolase family protein  98.31 
 
 
655 aa  239  9e-62  Frankia sp. EAN1pec  Bacteria  normal  0.398765  normal  0.788478 
 
 
-
 
NC_007777  Francci3_3442  ABC-type branched-chain amino acid transport systems periplasmic component-like  28 
 
 
425 aa  53.9  0.000005  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6824  hypothetical protein  30.89 
 
 
401 aa  44.7  0.003  Frankia sp. EAN1pec  Bacteria  normal  normal  0.759789 
 
 
-
 
NC_009921  Franean1_3366  hypothetical protein  33.68 
 
 
404 aa  45.1  0.003  Frankia sp. EAN1pec  Bacteria  normal  0.729663  normal 
 
 
-
 
NC_009921  Franean1_3169  putative Leu/Ile/Val-binding lipoprotein transmembrane  30.39 
 
 
402 aa  44.7  0.004  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2791  Extracellular ligand-binding receptor  30.37 
 
 
436 aa  43.9  0.006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.55279  normal  0.125183 
 
 
-
 
NC_009921  Franean1_2025  hypothetical protein  34.48 
 
 
422 aa  43.5  0.007  Frankia sp. EAN1pec  Bacteria  normal  0.0203629  normal  0.690247 
 
 
-
 
NC_009484  Acry_1866  extracellular ligand-binding receptor  22.64 
 
 
373 aa  43.5  0.007  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4659  extracellular ligand-binding receptor  26.13 
 
 
378 aa  43.5  0.008  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00580673 
 
 
-
 
NC_013173  Dbac_1404  Extracellular ligand-binding receptor  30.43 
 
 
383 aa  43.5  0.008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.11568  n/a   
 
 
-
 
NC_009921  Franean1_7028  hypothetical protein  26.36 
 
 
419 aa  43.1  0.009  Frankia sp. EAN1pec  Bacteria  normal  0.557944  normal 
 
 
-
 
NC_007777  Francci3_4269  ABC-type branched-chain amino acid transport systems periplasmic component-like  30.77 
 
 
438 aa  43.1  0.009  Frankia sp. CcI3  Bacteria  hitchhiker  0.000244738  normal 
 
 
-
 
NC_009921  Franean1_1952  hypothetical protein  27.15 
 
 
442 aa  43.1  0.01  Frankia sp. EAN1pec  Bacteria  normal  0.780394  normal  0.542159 
 
 
-
 
NC_010002  Daci_4823  extracellular ligand-binding receptor  33.01 
 
 
437 aa  43.1  0.01  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.615465 
 
 
-
 
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