| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4269 |
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| Symbol | |
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| ID | 3907236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5092992 |
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| End bp | 5094308 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637881595 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like |
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| Protein accession | YP_483344 |
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| Protein GI | 86742944 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000244738 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAGC CGAGGCCGTC GACGGTGAGT GGCGCGACGG ATCCGATACC GCAGAGGAGC
ACTGTTGCGA TGTTCTTACC CGGAAGGCCG TCGTTATTAC GGTCGACTGC ACTGATCTCT
ATCCTGATTA GCCTGATCGG ACTGGTTGCG TGCACCGCTT CGGAGGATTC CACCGGACGC
ACCGGAACAG CTGCCTGCGC CACACCGGGC ATAACTGAGA CCGAGATCAA GGCCGGCGTT
CTTTTCCCTG ACACCGGGCC GTTCGCGCAC AGTATGCGCG CGTTCCGGGC CGGAATCGAT
GCACGTTTCG GCGAAGCCAA CGCCGCAGGC GGCGTCAACG GGCGGAAGAT TGTCTACAGC
TGGCGGGATG ATGTCTCCGA CCCCCAGTTG AACCTCGCCG CGGCCCGCGA GCTCGTCCAG
AAGGAAGAGG TCTTCGGCAT CATAGAAGGA CTGGGTGCGG TCTCCGGCTC AGCCCAGTAC
CTCGCGGATC TGAACGTGCC GATCGTCGGA CTGGGAGCCG AACCCGTCTG GGCCGCGCAC
GAGAACATGG TCTCGTGGCA TCACTATACA GTCCCGGCCG GGTCGTCCAC CGTCTGGGGG
GATTTCATTC GCGGTGAGGG GGGAACCCGG AGCGCCATGG TCGACGTAGC GTTGAACGCT
GCCGTGCACG ACTATCATCG GCAGCTCGTT GACAGCCTGC AAGCGGCCGG TGTCAGCGTG
GACATAAACT TCGAGGTGAC CGCGGAGACG ACCAGCTTCG AGGCGTTGGC CAGGCAAATG
AAGGCGGCTA ACATCGACAC CCTTACCGGC GTCATCACCC CGGACGTCCT CACTCAGATC
CTCCCCGCGG CCCGTGCCGC CGGCGTGAAC CTCAAGACGG TGCTCCTCTC GCTCGGCTAC
GATCGGGCCC TGCTGACCGA TCTCGGCCCG GCCCTGGCCG GCACCAACAT CTACATCAGC
TTCGTCCCGT TCGAGCTGAA CACCCCCGCG CATCAGCGGC TGCTCGCCGC GATGACCCGC
TACTCTCCGC AGACCCAGCC GCCGGAGCAG GAAAGCGCGG TCTTCGGTTG GTTGTCCGCC
GATCTGTTCC TGCACGGCCT GCAAGCCGCC GGCGCCTGCC CGACCCACCA GTCGTTCCTA
CAGGGTCTGC ACTCCGTGCA CGACTACGAC GGCACTGGCC TGCTCCCCAA GCCGGTTGAT
CTCGCGAAAA ACCGCGGCCA ACTCGGCAAC TGCTATTATT TCATGCGCAT CAGCGGCGAC
GGCAGTCATT TCGTACCGCT GCAGTCCACG GCCCGTTGCG GTAATTTGAT CAACTGA
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| Protein sequence | MLEPRPSTVS GATDPIPQRS TVAMFLPGRP SLLRSTALIS ILISLIGLVA CTASEDSTGR
TGTAACATPG ITETEIKAGV LFPDTGPFAH SMRAFRAGID ARFGEANAAG GVNGRKIVYS
WRDDVSDPQL NLAAARELVQ KEEVFGIIEG LGAVSGSAQY LADLNVPIVG LGAEPVWAAH
ENMVSWHHYT VPAGSSTVWG DFIRGEGGTR SAMVDVALNA AVHDYHRQLV DSLQAAGVSV
DINFEVTAET TSFEALARQM KAANIDTLTG VITPDVLTQI LPAARAAGVN LKTVLLSLGY
DRALLTDLGP ALAGTNIYIS FVPFELNTPA HQRLLAAMTR YSPQTQPPEQ ESAVFGWLSA
DLFLHGLQAA GACPTHQSFL QGLHSVHDYD GTGLLPKPVD LAKNRGQLGN CYYFMRISGD
GSHFVPLQST ARCGNLIN
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