| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4659 |
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| Symbol | |
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| ID | 5673002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5559360 |
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| End bp | 5561327 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641243517 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001508933 |
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| Protein GI | 158316425 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.398765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.788478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCCGTT CATCCTTCAA TGACGGCTGG TCCTTCCGCC GGAAGACCGA CGCGTTTCTG
GAGATCCTCG GCCGGGCCGA CGCCCCCTGG CAGGACGTCC GGCTGCCCCA CGACGCGATG
GTGGGGCTCG AACGCGACAG GGCCGATACC GAAGCGGGTC AGCGCGGCTA CTACCCAAGC
GGGGAATACC AGTACAGAAA GACGTTCTTC GCGCCGGAGG AATACCGGAA CCGGCGAGTA
ACCCTTGAGT TCGAGGGTGT CTACCGGAAT GCCCGGGTGT TCATCAACGG CGATTTCGCG
GCGCAGCGCG CCTACGGCTA CTCCAATTTC TACGTCCACA CGGACCATCT ACTGAAGTAC
GGCAGCAACA ACGAGATCGT CGTGGAGGCG CGCAGTGGCA ACGACACCCG CTGGTACTCG
GGTGGCGGCG TCTACCGCAA CACGAAACTG ATCGTCGGCG ATCTGGTTCA CCTCGCACTG
GACGGGGTGA GGATCACCAC TCCGGCCGTG GACGACGACG GCACGGTCGT CGCCGGGGAC
ACCGCTCCGG TCACCACGTT CATCGGCGAC ACACTCACCC TGCGCCAGCG GCTGCCCGTG
CCACGACCGG AGCTGTGGGG GGTGGAGCGA CCCTATCTCT ACCTCTGCCG GACCAGCGTC
ACGGCGGACG GTGAGCTACT GGACCAGGAG ACCACGCGCT TCGGCATCCG TACGCTCACC
GTTGATCCGC TGCGGGGCCT GCGCATCAAC GGCGAGACGG TGAACCTGCG CGGCGCCTGC
ATCCACCACG ACAACGGGGT GATCGGCGCC GCGACCATCG ACCGCGCCGA ACAGCGCAGG
GTCGAGATCC TCAAACAGGC CGGTTTCAAC GCCATCCGCA GCGCCCACCA TCCGATGAGC
AAGGCGCTCC TCGACACCTG CGACCAGCTC GGCGTTCTCG TGATCGACGA GCTGTTCGAC
GCGTGGACCC GCTCCAAGGT GAGCCAGGAC TACGCCCTCG ACTTCGCCAC CTGGTGGGAG
TCCGACGTGC GGGCGATGGT CGACAAGGAC TTCAACCATC CCAGTGTCAT CCTCTACTCG
ATCGGGAACG AGATCCCGGA GACGGGCACC GCCGCCGGCG CGGCGATCAG CCGCCGGCTC
GCCGAGACGA TCCGCTCGAT CGACAGCACC AGGTTCGTCA CGAACGGCGT CAACGGACTC
CTCGCCGGCG GCCCCGACCT GCTCGCCTCC TTCGCCGGCG AATCCCGGAA GAAGGACAGC
GAGAGCCTCG ACGTCAACGG CTTCATGACG CGGTTCCGTG AGTTCATGCC AATCCTCATG
AGCTCCGAGG TCGTCGGTTC GAAGACCGCC GAGTCGATAG CCTGCCTCGA TGTCGCCGGC
TACAACTACC TCGAATCACG GTACGGGCAG GACGGGGCGC AGTTCCCCAA CCGGGTGATC
GTCGGAACCG AGACCTATCC CACCGACATC GACACGAACT GGCGGCTCGA GATCGGTTTC
GTCTACCCCG ACCTCGAGGT CGTCAAGCAG TACGTCGACA TCGACCACGG CGACTACCAG
GCCACCTTCC AACCGGCCAT CCTGGCCGGC GCCGCCGCTC TCGGGCTCGT CGTCGACTTC
ACCGAGCCGG CCAACGCCGC GTGCATCGCC ACCCTTGAGG CCGCGCTGCC AGCACTCACC
GGCAAGCTGG TCGACCCGGC GACCGTGCCC TCAGGCCAGC CCACCCCCGG AACATCCGAA
AGCGCCGCCT GCCGCTACCT GACCCTGTTC CAGGCGATCG CCGAGAAGGC CGGCAAGGAC
CTCACCTACC AGTCCTTCCA GCAGGCCGCG TTCTCTCTCG GTTCCTTCCA GGTCCCCACC
CTGCGGGACA AGGCCACCTA CAGCCGCGAG ACACCCCACG GCGCCGTCCC CCCGCGCCTG
TTCACGTTCG ATCCCGCGAA GAAGAACTTC TTCCCCGCCG GGAGCTGA
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| Protein sequence | MIRSSFNDGW SFRRKTDAFL EILGRADAPW QDVRLPHDAM VGLERDRADT EAGQRGYYPS
GEYQYRKTFF APEEYRNRRV TLEFEGVYRN ARVFINGDFA AQRAYGYSNF YVHTDHLLKY
GSNNEIVVEA RSGNDTRWYS GGGVYRNTKL IVGDLVHLAL DGVRITTPAV DDDGTVVAGD
TAPVTTFIGD TLTLRQRLPV PRPELWGVER PYLYLCRTSV TADGELLDQE TTRFGIRTLT
VDPLRGLRIN GETVNLRGAC IHHDNGVIGA ATIDRAEQRR VEILKQAGFN AIRSAHHPMS
KALLDTCDQL GVLVIDELFD AWTRSKVSQD YALDFATWWE SDVRAMVDKD FNHPSVILYS
IGNEIPETGT AAGAAISRRL AETIRSIDST RFVTNGVNGL LAGGPDLLAS FAGESRKKDS
ESLDVNGFMT RFREFMPILM SSEVVGSKTA ESIACLDVAG YNYLESRYGQ DGAQFPNRVI
VGTETYPTDI DTNWRLEIGF VYPDLEVVKQ YVDIDHGDYQ ATFQPAILAG AAALGLVVDF
TEPANAACIA TLEAALPALT GKLVDPATVP SGQPTPGTSE SAACRYLTLF QAIAEKAGKD
LTYQSFQQAA FSLGSFQVPT LRDKATYSRE TPHGAVPPRL FTFDPAKKNF FPAGS
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