9 homologs were found in PanDaTox collection
for query gene EcSMS35_A0002 on replicon NC_010488
Organism: Escherichia coli SMS-3-5



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010488  EcSMS35_A0002  replication protein  100 
 
 		 289 aa  592  1e-168  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.00000275474  normal  1 
 
 
-
 
NC_011350  ECH74115_B0089  replication protein  98.25 
 
 		 285 aa  573  1.0000000000000001e-162  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.0314206  normal  1 
 
 
-
 
NC_009787  EcE24377A_C0025  replication protein  96.84 
 
 		 285 aa  541  1e-153  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009786  EcE24377A_F0037  replication protein  96.14 
 
 		 285 aa  538  9.999999999999999e-153  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010660  SbBS512_A0283  replication protein  95.44 
 
 		 285 aa  527  1e-149  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.00000000232137  n/a   
 
 
-
 
NC_011204  SeD_B0067  replication protein  78.06 
 
 		 289 aa  423  1e-117  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.434095  normal  1 
 
 
-
 
NC_010157  YpAngola_B0078  replication protein  77.62 
 
 		 288 aa  417  1e-116  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009829  Spro_4953  replication initiation protein  31.64 
 
 		 285 aa  78.6  0.0000000000001  Serratia proteamaculans 568  Bacteria  normal  0.368158  normal  1 
 
 
-
 
NC_009704  YpsIP31758_A0041  hypothetical protein  29.89 
 
 		 345 aa  42.7  0.008  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>