| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0283 |
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| Symbol | repA1 |
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| ID | 6273622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | + |
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| Start bp | 193116 |
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| End bp | 193973 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641728896 |
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| Product | replication protein |
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| Protein accession | YP_001883286 |
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| Protein GI | 187734377 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03474] incFII family plasmid replication initiator RepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 68 |
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| Plasmid unclonability p-value | 0.00000000232137 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGATC TTCAACAAAC TTATTACCGC CAGGTAAAGA ACCCGAATCC GGTGTTCACA
CCCCGTGAAG GTGCCCGGAC GCTTCCGTTC TGCGGGAAAC TGATGGAAAA GGCGGTGGGC
TTCACCTCCC GTTTTGATTT CGCCATTCAT GTGGCACATG CCCGTTCGCT TGGTCTGCGT
CGGCGCATGC CACCGGTACT ACGTCGCCGG GCCATTGATG CGCTGCTGCA GGGGCTGTGT
TTTCACTATG ACCCACTGGC CAACCGCGTC CAGTGTTCCA TCACCACGCT GGCCATTGAG
TGCGGACTGG CGACGGAGTC TGCTGCCGGA AAACTCTCCA TCACCCGGGC CACCCGGGCC
CTGACGTTCC TTGCAGAGCT GGGACTGATT ACCTACCAGA CGGAATATGA CCCGCTTATC
GGGTGCTACA TTCCGACCGA TATCACGTTC ACATCTGCAC TGTTTGCTGC CCTCGATGTA
TCAGAGGAGG CAGTGGCCGC CGCGCGCCGC AGTCGTGTGG AATGGGAAAA CAGACAGCGC
AAAAAGCAGG GGCTGGATAC CCTGGGTATG GATGAACTGA TGGCGAAAGC CTGGCGTTTT
GTTCGTGAGC GTTTCCGCAG TTACCAGACA GAGCTTAAGT CCCGTGGAAT GAAGCGTGCC
CGTGCGCGTC GTGATGCGGA CAGGCAGCGT CAGGATATTG TCACCCTGGT GAAACGGCAA
CTGACGCGTG AAATCTCGGA AGGGCGCTTC ACTGCCAGTC GTGAGGCGGT AAAACGTGAA
GTGGAGCGTC GTGTGAAGGA GCGCATGATT CTGTCACGTA ACCGTAATTA CAGCCGGCTG
GCCACAGCTT CCCCCTGA
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| Protein sequence | MTDLQQTYYR QVKNPNPVFT PREGARTLPF CGKLMEKAVG FTSRFDFAIH VAHARSLGLR
RRMPPVLRRR AIDALLQGLC FHYDPLANRV QCSITTLAIE CGLATESAAG KLSITRATRA
LTFLAELGLI TYQTEYDPLI GCYIPTDITF TSALFAALDV SEEAVAAARR SRVEWENRQR
KKQGLDTLGM DELMAKAWRF VRERFRSYQT ELKSRGMKRA RARRDADRQR QDIVTLVKRQ
LTREISEGRF TASREAVKRE VERRVKERMI LSRNRNYSRL ATASP
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