| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0002 |
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| Symbol | repA1 |
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| ID | 6106557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 904 |
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| End bp | 1773 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641614750 |
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| Product | replication protein |
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| Protein accession | YP_001739891 |
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| Protein GI | 170650780 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03474] incFII family plasmid replication initiator RepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000275474 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGATG GTGTGACTGA TCTTCAACAA ACGTATTACC GCCAGGTAAA GAACCCGAAT
CCGGTGTTCA CACCCCGTGA AGGTGCCGGA ACGCTGAAGT TCTGCGAAAA ACTGATGGAA
AAGGCGGTGG GCTTCACCTC CCGTTTTGAT TTCGCCATTC ATGTGGCACA TGCCCGTTCG
AAGGGACTGC GTCGGCGCAT GCCACCGGTA CTGCGTCGCC GGGCCATTGA TGCGCTGCTG
CAGGGGCTGT GTTTTCACTA TGACCCGCTG GCCAACCGCG TCCAGTGCTC CATCACTACG
CTGGCCATTG AGTGCGGACT GGCGACGGAG TCTGCTGCCG GAAAACTCTC CATCACCCGG
GCCACCCGAG CCCTGACGTT CCTTGCAGAG CTGGGACTGA TTACCTACCA GACGGAATAT
GATCCGCTTA TCGGGTGCTA CATTCCGACC GATATCACGT TCACACCGGC GCTATTTGCC
GCCCTTGATG TGTCTGAGGA TGCAGTGGTT GCTGCGCGCC GCAGTCGTGT TGAATGGGAA
AACAGACAGC GCAAAAAGCA GGGACTGGAT ACCCTGGGTA TGGATGAACT GATAGCGAAA
GCCTGGCGTT TTGTGCGTGA GCGTTTCCGC AGTTACCAGA CAGAGCTTAA GTCCCGTGGA
ATAAAGCGTG CCCGTGCGCG TCGTGATGCG AACAGGGAAC GTCAGGATAT CGTCACCCTG
GTGAAACGGC AGCTGACGCG TGAAATCTCG GAAGGGCGCT TCACTGCCAA TCGTGAGGCG
GTAAAACGCG AAGTGGAGCG TCGTGTGAAA GAGCGCATGA TTCTGTCACG TAACCGTAAT
TACAGCCGGC TGGCCACAGC TTCCCCCTGA
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| Protein sequence | MQDGVTDLQQ TYYRQVKNPN PVFTPREGAG TLKFCEKLME KAVGFTSRFD FAIHVAHARS
KGLRRRMPPV LRRRAIDALL QGLCFHYDPL ANRVQCSITT LAIECGLATE SAAGKLSITR
ATRALTFLAE LGLITYQTEY DPLIGCYIPT DITFTPALFA ALDVSEDAVV AARRSRVEWE
NRQRKKQGLD TLGMDELIAK AWRFVRERFR SYQTELKSRG IKRARARRDA NRERQDIVTL
VKRQLTREIS EGRFTANREA VKREVERRVK ERMILSRNRN YSRLATASP
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