| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_B0089 |
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| Symbol | repA |
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| ID | 6966489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011350 |
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| Strand | + |
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| Start bp | 56108 |
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| End bp | 56965 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643383986 |
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| Product | replication protein |
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| Protein accession | YP_002268465 |
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| Protein GI | 209395532 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03474] incFII family plasmid replication initiator RepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0314206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGATC TTCAACAAAC GTATTACCGC CAGGTAAAGA ACCCGAATCC GGTGTTCACA
CCCCGTGAAG GTGCCGGAAC GCTGAAGTTC TGCGAAAAAC TGATGGAAAA GGCGGTGGGC
TTCACCTCCC GTTTTGATTT CGCCATTCAT GTGGCACATG CCCGTTCGAA GGGACTGCGT
CGGCGCATGC CACCGGTACT GCGTCGCCGG GCTATTGATG CGCTGCTGCA GGGGCTGTGT
TTTCACTATG ACCCGCTGGC CAACCGTGTC CAGTGCTCCA TCACCACACT GGCCATTGAG
TGCGGACTGG CGACGGAGTC TGCTGCCGGA AAACTCTCCA TCACCCGTGC CACCCGGGCC
CTGACGTTCC TGTCAGAGCT GGGACTGATT ACCTACCAGA CGGAATATGA CCCGCTTATC
GGGTGCTACA TTCCGACCGA CATCACGTTC ACACCGGCTC TGTTTGCTGC CCTTGATGTG
TCTGAGGATG CAGTGGCAGC TGCGCGCCGC AGCCGTGTTG AATGGGAAAA CAGGCTGCGC
AAAAAGCAGG GGCTGGATAC CCTGGGTATG GATGAACTGA TAGCGAAAGC CTGGCGTTTT
GTGCGTGAGC GTTTCCGCAG TTACCAGACA GAGCTTAAGT CACGGGGAAT AAAGCGTGCC
CGTGCGCGTC GTGATGCGGG CAGGGAACGT CAGGATATCG TCACCCTGGT GAAACGGCAG
CTGACGCGTG AAATCTCGGA AGGGCGCTTC ACTGCTAATC GTGAGGCGGT AAAACGCGAA
GTGGAGCGTC GTGTGAAGGA GCGCATGATT CTGTCACGTA ACCGCAATTA CAGCCGGCTG
GCCACAGCTT CCCCCTGA
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| Protein sequence | MTDLQQTYYR QVKNPNPVFT PREGAGTLKF CEKLMEKAVG FTSRFDFAIH VAHARSKGLR
RRMPPVLRRR AIDALLQGLC FHYDPLANRV QCSITTLAIE CGLATESAAG KLSITRATRA
LTFLSELGLI TYQTEYDPLI GCYIPTDITF TPALFAALDV SEDAVAAARR SRVEWENRLR
KKQGLDTLGM DELIAKAWRF VRERFRSYQT ELKSRGIKRA RARRDAGRER QDIVTLVKRQ
LTREISEGRF TANREAVKRE VERRVKERMI LSRNRNYSRL ATASP
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