Gene SeD_B0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0067 
Symbol 
ID6870873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp35158 
End bp36027 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content57% 
IMG OID642783211 
Productreplication protein 
Protein accessionYP_002213905 
Protein GI198241702 
COG category 
COG ID 
TIGRFAM ID[TIGR03474] incFII family plasmid replication initiator RepA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.434095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones105 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACA CCCGAACACT GTTCACTCAT TACCGACAGG TCAAAAATCC AAATCCGGAA 
TTCACGCCGC GAGAAGGGAA AAAGACCCTG CCGTTCTGTC GTAAGCTGAT GGCGAAAGCC 
GAAGGGTTCA CGTCCCGTTT TGATTTTTCC GTCCATGTGG CGTTCGTTCG TTCGCTGGGA 
AAGCGTCACC GGATGCCGCC TTTGCTGCGC CGTCGTGCCA TCGATGCGCT GCTTCAGGGG 
TTGTGCTTCC ATTATGATCC ACTGGCCAAC CGTGTACAGA GATCCATCAC CAATCTGGCT 
ATAGAGTGCG GTCTGGCCAC CGAGTCAAAA AGTGGCAATC TGTCCATCAC CCGCGCCACA 
CGGGCGCTGA AGTTTATGGC AGAGCTGGGG CTGATTACCT ACCAGACCGA GTATGATCCG 
CAGATTGGCT GCAACATCCC GACCGATATC ACCTTCACGC CGGCACTGTT CTCCGCGCTC 
GACGTCTCTG ACGTGGCTGT TGTGGCCGCC CGCCGCAGTC GTGTCGAATG GGAAAATCAG 
CAGCGCAAAA AGCAGAATCT GGAGCCGCTG GAGATGGACG AACTGATAGC GAAAGCCTGG 
CGATTTGTGC GCGAACGGTT CCGCAGCTAC CAGTCTGAAC GTAAACTGCA CGGACTGAAA 
CGCGCCCGGG CGCGGCGTGA CGCGGACAGA ACCCGTAAGG ACATCGAAAC ACTGGTGAAA 
CTGCAGCTGA CGCGGGAATA CGCCAGCGGA CGCTTTACCG GCGGGCTTGA TGCCATGAAG 
CGGGAGCTGC AGCGGCGCGT GAAAGAGCGC ATGATGATGT CGCGGGGCAA AAACTACACG 
CGACTGACCA TGGCCACCGT CCCCATATAA
 
Protein sequence
MTDTRTLFTH YRQVKNPNPE FTPREGKKTL PFCRKLMAKA EGFTSRFDFS VHVAFVRSLG 
KRHRMPPLLR RRAIDALLQG LCFHYDPLAN RVQRSITNLA IECGLATESK SGNLSITRAT 
RALKFMAELG LITYQTEYDP QIGCNIPTDI TFTPALFSAL DVSDVAVVAA RRSRVEWENQ 
QRKKQNLEPL EMDELIAKAW RFVRERFRSY QSERKLHGLK RARARRDADR TRKDIETLVK 
LQLTREYASG RFTGGLDAMK RELQRRVKER MMMSRGKNYT RLTMATVPI