10 homologs were found in PanDaTox collection
for query gene EcSMS35_4934 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010498  EcSMS35_4934  hypothetical protein  100 
 
 		 87 aa  177  2.9999999999999997e-44  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  0.976252 
 
 
-
 
CP001509  ECD_04261  conserved hypothetical protein  96.55 
 
 		 87 aa  169  9e-42  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3671  helix-turn-helix domain-containing protein  96.55 
 
 		 87 aa  169  9e-42  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.538584 
 
 
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NC_011353  ECH74115_5900  hypothetical protein  96.55 
 
 		 87 aa  169  9e-42  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_1221  XRE family transcriptional regulator  32.84 
 
 		 119 aa  48.1  0.00004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_1132  XRE family transcriptional regulator  37.88 
 
 		 157 aa  43.9  0.0008  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010159  YpAngola_A3858  helix-turn-helix DNA binding domain-containing protein  31.75 
 
 		 120 aa  41.6  0.003  Yersinia pestis Angola  Bacteria  normal  0.793488  normal  0.0443892 
 
 
-
 
NC_010159  YpAngola_A4149  helix-turn-helix DNA binding domain-containing protein  31.75 
 
 		 120 aa  42  0.003  Yersinia pestis Angola  Bacteria  decreased coverage  0.00609324  hitchhiker  0.00863395 
 
 
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NC_013421  Pecwa_0405  transcriptional regulator, XRE family  31.88 
 
 		 123 aa  41.6  0.004  Pectobacterium wasabiae WPP163  Bacteria  normal  0.267838  n/a   
 
 
-
 
NC_009708  YpsIP31758_0887  helix-turn-helix DNA binding domain-containing protein  31.75 
 
 		 120 aa  40  0.009  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
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