46 homologs were found in PanDaTox collection
for query gene DhcVS_965 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013552  DhcVS_965  iron-sulfur cluster-binding protein  100 
 
 
99 aa  207  3e-53  Dehalococcoides sp. VS  Bacteria  normal  0.0363089  n/a   
 
 
-
 
NC_009455  DehaBAV1_0986  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  81.72 
 
 
102 aa  166  9e-41  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1164  iron-sulfur cluster-binding protein  75.25 
 
 
102 aa  162  1.0000000000000001e-39  Dehalococcoides ethenogenes 195  Bacteria  normal  0.624283  n/a   
 
 
-
 
NC_010676  Bphyt_4337  4Fe-4S ferredoxin iron-sulfur binding domain protein  40.91 
 
 
98 aa  77.8  0.00000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.322839 
 
 
-
 
NC_007509  Bcep18194_C6638  4Fe-4S ferredoxin, iron-sulfur binding  39.77 
 
 
100 aa  75.9  0.0000000000002  Burkholderia sp. 383  Bacteria  normal  0.108852  normal  0.0651062 
 
 
-
 
NC_010508  Bcenmc03_2386  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  37.5 
 
 
98 aa  72.8  0.000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.479813 
 
 
-
 
NC_008060  Bcen_1769  4Fe-4S ferredoxin, iron-sulfur binding  37.93 
 
 
98 aa  73.2  0.000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3785  putative 4Fe-4S ferredoxin, iron-sulfur binding  38.82 
 
 
130 aa  73.2  0.000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_2381  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  37.93 
 
 
98 aa  73.2  0.000000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1530  4Fe-4S ferredoxin iron-sulfur binding domain protein  29.33 
 
 
80 aa  48.9  0.00002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3046  ferredoxin (flavodoxin) oxidoreductase  34.12 
 
 
1190 aa  48.5  0.00003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5233  pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein  34.15 
 
 
1202 aa  48.1  0.00004  Mycobacterium sp. JLS  Bacteria  normal  normal  0.938464 
 
 
-
 
NC_008705  Mkms_4954  pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein  34.15 
 
 
1191 aa  48.1  0.00004  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4865  pyruvate:ferredoxin (flavodoxin) oxidoreductase  34.15 
 
 
1191 aa  48.1  0.00004  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3050  4Fe-4S ferredoxin iron-sulfur binding domain protein  32.14 
 
 
432 aa  47.4  0.00006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009712  Mboo_1469  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  30.86 
 
 
87 aa  47  0.00009  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009012  Cthe_3120  pyruvate flavodoxin/ferredoxin oxidoreductase-like protein  32.14 
 
 
1178 aa  47  0.00009  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1226  4Fe-4S ferredoxin iron-sulfur binding domain protein  30.95 
 
 
432 aa  45.8  0.0002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0096  pyruvate ferredoxin/flavodoxin oxidoreductase  34.88 
 
 
1174 aa  45.1  0.0003  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.000539296  hitchhiker  0.00000356908 
 
 
-
 
NC_011666  Msil_2987  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein  30.23 
 
 
1217 aa  45.1  0.0003  Methylocella silvestris BL2  Bacteria  n/a    normal  0.105642 
 
 
-
 
NC_008527  LACR_0475  pyruvate:ferredoxin oxidoreductase, fusion of alpha, beta and gamma subunit  31.25 
 
 
1223 aa  44.7  0.0004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_1328  pyruvate ferredoxin/flavodoxin oxidoreductase  32.93 
 
 
1184 aa  44.3  0.0005  Atopobium parvulum DSM 20469  Bacteria  normal  decreased coverage  0.000692132 
 
 
-
 
NC_013216  Dtox_0088  pyruvate ferredoxin/flavodoxin oxidoreductase  34.67 
 
 
1207 aa  44.3  0.0006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.000440462 
 
 
-
 
NC_011830  Dhaf_1875  protein of unknown function DUF169  29.49 
 
 
319 aa  43.1  0.001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1811  ferredoxin  36.25 
 
 
64 aa  43.1  0.001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.243478  normal 
 
 
-
 
NC_008751  Dvul_0113  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  30.49 
 
 
62 aa  42.7  0.002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.245579 
 
 
-
 
NC_011830  Dhaf_0054  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein  28.41 
 
 
1176 aa  42.4  0.002  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00219154  n/a   
 
 
-
 
NC_011769  DvMF_2120  4Fe-4S ferredoxin iron-sulfur binding domain protein  30.49 
 
 
62 aa  42.7  0.002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_0603  pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein  32 
 
 
1178 aa  42.7  0.002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_0806  pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein  30.95 
 
 
1185 aa  42.4  0.002  Elusimicrobium minutum Pei191  Bacteria  normal  normal  0.0120918 
 
 
-
 
NC_012880  Dd703_0490  pyruvate ferredoxin/flavodoxin oxidoreductase  27.5 
 
 
1170 aa  42  0.003  Dickeya dadantii Ech703  Bacteria  normal  0.836719  n/a   
 
 
-
 
NC_002950  PG0548  pyruvate ferredoxin/flavodoxin oxidoreductase family protein  30.23 
 
 
1193 aa  42  0.003  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_010718  Nther_1088  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein  31.71 
 
 
1177 aa  41.6  0.004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.806923  hitchhiker  0.00527815 
 
 
-
 
NC_009712  Mboo_0879  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  29.11 
 
 
88 aa  41.2  0.005  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.638489  normal 
 
 
-
 
NC_013173  Dbac_2127  4Fe-4S ferredoxin iron-sulfur binding domain protein  33.7 
 
 
427 aa  41.2  0.005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1553  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  32.14 
 
 
438 aa  40.8  0.006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.371983 
 
 
-
 
NC_009675  Anae109_2754  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  30 
 
 
426 aa  40.8  0.006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.964993  normal 
 
 
-
 
NC_009483  Gura_1569  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  32.95 
 
 
431 aa  40.8  0.006  Geobacter uraniireducens Rf4  Bacteria  normal  0.433482  n/a   
 
 
-
 
NC_008726  Mvan_4109  pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein  32.94 
 
 
1193 aa  40.8  0.007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.118304  normal  0.224474 
 
 
-
 
NC_009456  VC0395_0463  pyruvate-flavoredoxin oxidoreductase  28.89 
 
 
1079 aa  40.4  0.008  Vibrio cholerae O395  Bacteria  normal  0.0388301  n/a   
 
 
-
 
NC_008262  CPR_2032  pyruvate-flavodoxin oxidoreductase  30 
 
 
1171 aa  40.4  0.008  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2318  pyruvate-flavodoxin oxidoreductase  30 
 
 
1171 aa  40.4  0.008  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2468  pyruvate:ferredoxin (flavodoxin) oxidoreductase  28.57 
 
 
1207 aa  40.4  0.008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1261  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein  32.58 
 
 
1222 aa  40.4  0.009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_002977  MCA0769  pyruvate ferredoxin/flavodoxin oxidoreductase family protein  29.27 
 
 
1188 aa  40.4  0.009  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_0224  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  25.97 
 
 
367 aa  40  0.01  Methanoculleus marisnigri JR1  Archaea  normal  0.581044  n/a   
 
 
-
 
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