| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0096 |
|---|
| Symbol | |
|---|
| ID | 8427019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 103104 |
|---|
| End bp | 106628 |
|---|
| Gene Length | 3525 bp |
|---|
| Protein Length | 1174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645032492 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
|---|
| Protein accession | YP_003189682 |
|---|
| Protein GI | 258513460 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000539296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000356908 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG TTACAAAGAC TATGGATGGA AATGAAGCAG CTGCGTATAT GTCCTATGCC
TTTACAGAGG TAGCAGCAAT CTATCCTATT ACCCCGTCTT CTTTAATGGC AGAGCTGGTG
GATGAGTGGT CTGCTTATGG TAAGAGGAAC ATATTCGGAC AACCTTTGAA AGTTGTGGAA
ATGCAGTCTG AGGGTGGAGC CGCCGGTGCA GTGCACGGTT CCCTGGCTGC CGGGACATTG
ACGACCACGT ATACTTGCTC ACAAGGCTTG CTGTTGATGG TTCCCAATAT GTATAAAATT
TCCGGCGAAC TGCTTCCCGG CGTTTTTCAT GTTACAGCCA GGGCGATAGC GGGACACGCT
TTGTCAATTT TTGGTGATCA CCAGGATGTA ATGGCCTGTC GGCCGACCGG TTTTGCTATT
TTGGCTTCTT CCAGTGTACA GGAAGCCATG GATATGGCCG GTGTCGCACA TTTATCAGCT
ATTAAAGGCA GGATGCCGTT TATGCATTTC TTTGACGGTT TCCGGACTTC CCATGAAATC
CAAAAAATTG AAGTGATAAA TTATGAAGAT ATGGCTAAGC TGGTTGATTA TGAGGCATTA
AAAGAATTTA AGTCCAGGGG ATTAAATCCT GAGCATCCTG TGGTAAGGGG CTCGGCTCAA
AACCCGGATA TCTATTTTCA GGGTAAAGAA GCTGCCAACA GTTATTATCA AAAAGTACCT
TCTATAGTAG AAGGCTATAT GCAGGAAATC GGCAAGATTA CAGGCCGTCA ATATAAGCTC
TTTGATTACT ATGGCGCGGC TGACGCCGAG TATGTAATAG TAGCCATGGG TTCGGTATGT
GAAACAATCG AAGAAACAAT TGACTACTTA TTGAGCAAGG GTGAAAAAGT TGGGGTTGTT
AAAGTACGCC TCTACCGTCC TTTTTCAGTA GAGCACTTTT TAGCTGTCAT GCCTGGCACG
GTAAAGAAAA TTGCTGTAAT GGACAGAACC AAGGAACATG GTTCTGTTGG TGAACCCTTG
TATCTGGATG TTGTTAATGT ATTCTATAAG AAAGAAAATA AGCCGCTGAT TGTTGGCGGT
CGCTATGGTC TGGGTTCTAA AGATACCACT CCTTCCCAAA TAATAGCAGT ATTTAATAAC
CTGAAACAGG ATGATCCTAA GGATCGCTTT ACTGTCGGCA TTTTAGATGA TGTTACTTAC
ACATCACTGC CGGAAGAGCC CCTGGTTGAT ACCAGTGCTG AAGGTACTAT TTGCTGTAAA
TTCTGGGGTT TGGGATCAGA CGGAACGGTT GGTGCCAACA AGTCTGCTAT TAAAATTATT
GGTGACCACA CGGACTTATA TGCTCAAGGT TATTTTGCCT ATGACAGTAA GAAGTCCGGC
GGTTCGACTA TTTCTCATTT GAGATTTGGG AAAAACCCGA TTAAGTCAAC TTATCTGGTA
ATAAATTCCG ATTATACTGC CTGCCATAAC AGTGCTTATA TTTATAAATA TGATGTACTG
AAGGGTTTAA AGAAAAACGG TACTTTTGTA CTCAACTGCC AGTGGAGTCA GGAAGAGTTG
GAAGAAAAAC TTCCGGCTAA GGTTAAAAGG TTTGTAGCCG AAAACAATAT TAATTTCTAT
ATTATTGATG CCGTTAAGAT TGCCCAGGAA ATCGGATTGG GTGGTCACAT TAACATGATT
ATGCAGTCAG CTTTCTTTAA ATTGGCCAAT GTAATTCCGG TAGAAGATGC TGTTAAATAT
CTGAAAGATT CTATAGAGAA GTCTTATGGT AAAAAAGGCG ACAATATTGT TGATATGAAC
TTTGCGGCGG TAGATCGCGG TATCGACGCT CTGGTCAAAG TTAATGTACC GGCAGATTGG
GCCGGTGTGC AGGATGAAGC AGAAGTTGAA CAGAATGAGC CTGATTTTAT CAAGAATATT
TTACGATTAA TGGTTAAAAA CGAGGGCGAC TCCCTTCCGG TTAGTGCCTT TATGGAAAGA
GTTGACGGCA GTTTGCCGGT AGGATCTTCC GCTTATGAAA AACGGGGTAT TGCTGTAATG
GTGCCGGAGT GGCAGCCGGA TAATTGTATC CAGTGCAATC AGTGCTCTTT TGTGTGCCCT
CACGCAGCCA TAAGGCCGTT TTTGCTGAAC AGTGAAGAAG CTGCAAAGGC ACCGGCAACT
TTTATAACTA AGGCTGCAAA AGGCAAAGGG TTGGAGGAAC TGGGACTGCA GTATCGCATG
CAGGTAAGCA CTCTGGATTG TACCGGCTGC GGAAACTGTG TAGAAACCTG TCCGGCTAAG
GAGAAGGCCT TGGTTCTGAA GTCTGCGGAT GAGCAAAACA GCGAGCAGGT AGCTAACTGG
GGGTTTGCCG CAACTGTCAG TATCAAGGAT AAATTACTCG ATCCTAAGAC ACTTAAAGGC
AGCCAGTTTA AACAGCCTTT GTTTGAGTTC AGCGGAGCCT GTCCCGGTTG CGGTGAGACT
CCTTATATAA AACTTATAAC ACAATTATTC GGTGACAGGA TGATGATTGC CAATGCGACA
GGCTGTTCCT CTATTTATGG GGCCAGTTCT CCTGCTATAC CGTATACAAC TAATTCTGAA
GGCAAAGGCC CCTCCTGGGC AAACTCACTG TTTGAAGATA ATGCGGAATT TGGTTTCGGC
ATGTATCTAG GAGTTAAGCA GACCAGAGAT AAATTGGCTG GCTTAATGAA ACAAGTAGTA
GAGACTTCCG ACAGCGACGT ATTAAAAGAA GCCTGTCATG AGTGGTTGGC CGGCATGAAT
GAAGCCGAAG CTTCCAAGGC TGCCGCGTCT AAACTGCTGG CTGTTCTGGA AGGTATTGAT
TATAGCGGCA ATAAGGCTAT TGAGGAAATT GTAGAGAAGA AGGATTATTT GGTTAAGAAG
TCCCAGTGGA TTCTCGGCGG TGACGGCTGG GCTTATGATA TCGGTTTTGG CGGTTTGGAT
CATGTATTGG CCAGTGGGGA AAATGTAAAT GTATTGGTAA TGGATACAGA AGTTTACTCC
AATACCGGCG GACAGTCTTC CAAGGCTACT CCTACCGGAG CAGTTGCCAA ATTTGCGGCC
TCAGGCAAAA AGATTAAAAA GAAAGACATG GGCTTAATGG CTATGAGTTA TGGCTATATC
TATGTGGCTC AGATAGCTCT GGGTGCCAAC ATGAGCCAGG CCTTAAAGGC TATTGCAGAA
GCTGAAGCCT ATGACGGTCC GTCCTTAATT ATTGCTTATG CTCCTTGCAT TAACCATGGC
ATCAAGTCCG GTATGGGTAC CAGTACAGCA GAAATGAAAA AGGCTGTGGC AGCGGGCTAC
TGGCACCTTT ACAGATATAA TCCGATACTT AAAGATCAGG GTAAAAACCC GTTCATTCTG
GATTCTAAGG AGCCTCAAGA TTCTTACAAG GAGTTCCTTA CCGGTGAGGT ACGGTATGCT
TCCTTGCAGC AGACTTTCCC GGATATTGCG GAGAAACTGT TTGAAGCGGC TGAACAAGAC
TCTAAGGAGA GATTGGCCAA TTATAAACGC TTGGCCGGAG AATAA
|
|---|
| Protein sequence | MAKVTKTMDG NEAAAYMSYA FTEVAAIYPI TPSSLMAELV DEWSAYGKRN IFGQPLKVVE
MQSEGGAAGA VHGSLAAGTL TTTYTCSQGL LLMVPNMYKI SGELLPGVFH VTARAIAGHA
LSIFGDHQDV MACRPTGFAI LASSSVQEAM DMAGVAHLSA IKGRMPFMHF FDGFRTSHEI
QKIEVINYED MAKLVDYEAL KEFKSRGLNP EHPVVRGSAQ NPDIYFQGKE AANSYYQKVP
SIVEGYMQEI GKITGRQYKL FDYYGAADAE YVIVAMGSVC ETIEETIDYL LSKGEKVGVV
KVRLYRPFSV EHFLAVMPGT VKKIAVMDRT KEHGSVGEPL YLDVVNVFYK KENKPLIVGG
RYGLGSKDTT PSQIIAVFNN LKQDDPKDRF TVGILDDVTY TSLPEEPLVD TSAEGTICCK
FWGLGSDGTV GANKSAIKII GDHTDLYAQG YFAYDSKKSG GSTISHLRFG KNPIKSTYLV
INSDYTACHN SAYIYKYDVL KGLKKNGTFV LNCQWSQEEL EEKLPAKVKR FVAENNINFY
IIDAVKIAQE IGLGGHINMI MQSAFFKLAN VIPVEDAVKY LKDSIEKSYG KKGDNIVDMN
FAAVDRGIDA LVKVNVPADW AGVQDEAEVE QNEPDFIKNI LRLMVKNEGD SLPVSAFMER
VDGSLPVGSS AYEKRGIAVM VPEWQPDNCI QCNQCSFVCP HAAIRPFLLN SEEAAKAPAT
FITKAAKGKG LEELGLQYRM QVSTLDCTGC GNCVETCPAK EKALVLKSAD EQNSEQVANW
GFAATVSIKD KLLDPKTLKG SQFKQPLFEF SGACPGCGET PYIKLITQLF GDRMMIANAT
GCSSIYGASS PAIPYTTNSE GKGPSWANSL FEDNAEFGFG MYLGVKQTRD KLAGLMKQVV
ETSDSDVLKE ACHEWLAGMN EAEASKAAAS KLLAVLEGID YSGNKAIEEI VEKKDYLVKK
SQWILGGDGW AYDIGFGGLD HVLASGENVN VLVMDTEVYS NTGGQSSKAT PTGAVAKFAA
SGKKIKKKDM GLMAMSYGYI YVAQIALGAN MSQALKAIAE AEAYDGPSLI IAYAPCINHG
IKSGMGTSTA EMKKAVAAGY WHLYRYNPIL KDQGKNPFIL DSKEPQDSYK EFLTGEVRYA
SLQQTFPDIA EKLFEAAEQD SKERLANYKR LAGE
|
|---|
| |