35 homologs were found in PanDaTox collection
for query gene Clim_0933 on replicon NC_010803
Organism: Chlorobium limicola DSM 245



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010803  Clim_0933  CRISPR-associated RAMP protein, Cmr4 family  100 
 
 		 330 aa  685    Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_007355  Mbar_A1356  hypothetical protein  50.31 
 
 		 321 aa  291  1e-77  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.278075  normal  1 
 
 
-
 
NC_009767  Rcas_4240  CRISPR-associated RAMP Cmr4 family protein family protein  50.15 
 
 		 328 aa  282  5.000000000000001e-75  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.400432  normal  1 
 
 
-
 
NC_011831  Cagg_3826  CRISPR-associated RAMP protein, Cmr4 family  50.15 
 
 		 319 aa  279  4e-74  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.782464  hitchhiker  0.00621555 
 
 
-
 
NC_009523  RoseRS_2589  CRISPR-associated RAMP Cmr4 family protein family protein  47.45 
 
 		 330 aa  271  9e-72  Roseiflexus sp. RS-1  Bacteria  normal  0.598353  normal  0.467768 
 
 
-
 
NC_013385  Adeg_0806  CRISPR-associated RAMP protein, Cmr4 family  47.46 
 
 		 367 aa  270  2e-71  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011059  Paes_1989  CRISPR-associated RAMP protein, Cmr4 family  46.2 
 
 		 332 aa  265  8e-70  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.48391 
 
 
-
 
NC_010483  TRQ2_0316  CRISPR-associated RAMP Cmr4 family protein family protein  45.12 
 
 		 324 aa  242  7e-63  Thermotoga sp. RQ2  Bacteria  normal  0.157396  n/a   
 
 
-
 
NC_013385  Adeg_0915  CRISPR-associated RAMP protein, Cmr4 family  43.98 
 
 		 354 aa  196  4.0000000000000005e-49  Ammonifex degensii KC4  Bacteria  normal  0.994799  n/a   
 
 
-
 
NC_011831  Cagg_3812  CRISPR-associated RAMP protein, Cmr4 family  44.44 
 
 		 449 aa  181  1e-44  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.458595 
 
 
-
 
NC_012793  GWCH70_0318  CRISPR-associated RAMP protein, Cmr4 family  29.39 
 
 		 292 aa  82.4  0.00000000000001  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1196  CRISPR-associated RAMP protein, Cmr4 family  28.73 
 
 		 297 aa  81.3  0.00000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_0962  CRISPR-associated RAMP Cmr4 family protein  26.46 
 
 		 264 aa  79.7  0.00000000000007  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.60167  normal  0.960375 
 
 
-
 
NC_009972  Haur_0576  CRISPR-associated RAMP Cmr4 family protein family protein  28.46 
 
 		 278 aa  78.2  0.0000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_2690  CRISPR-associated RAMP Cmr4 family protein family protein  25.78 
 
 		 283 aa  72.8  0.000000000008  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0697  CRISPR-associated RAMP Cmr4 family protein family protein  27.07 
 
 		 293 aa  72.8  0.000000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_1482  Cmr4 family CRISPR-associated RAMP protein  28.51 
 
 		 245 aa  71.6  0.00000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.541255  normal  0.493855 
 
 
-
 
NC_010730  SYO3AOP1_0660  CRISPR-associated RAMP protein, Cmr4 family  26.12 
 
 		 258 aa  70.9  0.00000000003  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014213  Mesil_3378  hypothetical protein  26.52 
 
 		 262 aa  68.9  0.0000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010424  Daud_1820  CRISPR-associated RAMP Cmr4 family protein family protein  28.08 
 
 		 288 aa  68.2  0.0000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.303143  n/a   
 
 
-
 
NC_010483  TRQ2_1028  CRISPR-associated RAMP Cmr4 family protein family protein  28.73 
 
 		 292 aa  67.4  0.0000000003  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_15130  CRISPR-associated RAMP protein, Cmr4 family  24.44 
 
 		 325 aa  58.9  0.0000001  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013526  Tter_1949  CRISPR-associated RAMP protein, Cmr4 family  26.12 
 
 		 298 aa  58.2  0.0000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0261  CRISPR-associated RAMP Cmr4 family protein family protein  27.64 
 
 		 266 aa  57.8  0.0000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008553  Mthe_0647  CRISPR-associated RAMP Cmr4 family protein family protein  27.74 
 
 		 267 aa  56.6  0.0000005  Methanosaeta thermophila PT  Archaea  normal  0.481851  n/a   
 
 
-
 
NC_009616  Tmel_1660  CRISPR-associated RAMP Cmr4 family protein family protein  23.44 
 
 		 276 aa  53.9  0.000004  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_1315  CRISPR-associated RAMP protein, Cmr4 family  24.81 
 
 		 327 aa  52  0.00001  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010525  Tneu_0564  CRISPR-associated RAMP Cmr4 family protein family protein  32.33 
 
 		 296 aa  50.4  0.00004  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.0596645  hitchhiker  0.00107083 
 
 
-
 
NC_009634  Mevan_0108  CRISPR-associated RAMP Cmr4 family protein family protein  25.74 
 
 		 273 aa  50.4  0.00004  Methanococcus vannielii SB  Archaea  normal  0.0120254  n/a   
 
 
-
 
NC_013205  Aaci_2295  CRISPR-associated RAMP protein, Cmr4 family  32.33 
 
 		 297 aa  50.1  0.00006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_011901  Tgr7_1793  CRISPR-associated RAMP protein, Cmr4 family  30.15 
 
 		 294 aa  49.3  0.0001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.486311  n/a   
 
 
-
 
NC_009376  Pars_1117  CRISPR-associated RAMP Cmr4 family protein family protein  25.25 
 
 		 308 aa  48.1  0.0002  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.163915  normal  1 
 
 
-
 
NC_012034  Athe_2702  CRISPR-associated RAMP protein, Csm3 family  28.91 
 
 		 266 aa  46.2  0.0007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_008789  Hhal_0629  CRISPR-associated RAMP Cmr4 family protein family protein  23.99 
 
 		 304 aa  45.1  0.002  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1798  putative CRISPR-associated RAMP family protein  31.62 
 
 		 339 aa  43.5  0.004  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>