9 homologs were found in PanDaTox collection
for query gene Apre_0537 on replicon NC_013171
Organism: Anaerococcus prevotii DSM 20548



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013171  Apre_0537  primosome, DnaD subunit  100 
 
 
253 aa  516  1.0000000000000001e-145  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2939  putative DNA replication protein DnaD  28.08 
 
 
333 aa  71.6  0.00000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2622  DNA replication protein DnaD, putative  28.08 
 
 
333 aa  71.6  0.00000000001  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2346  primosome, DnaD subunit  26.6 
 
 
324 aa  71.2  0.00000000001  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000863397  n/a   
 
 
-
 
NC_013385  Adeg_0703  primosome, DnaD subunit  30.99 
 
 
409 aa  45.4  0.001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1204  DNA replication protein DnaD, putative  29.87 
 
 
226 aa  44.3  0.002  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2103  primosome, DnaD subunit  22.69 
 
 
280 aa  42.4  0.007  Desulfotomaculum reducens MI-1  Bacteria  normal  0.897597  n/a   
 
 
-
 
NC_013385  Adeg_1703  primosome, DnaD subunit  27.43 
 
 
263 aa  42.4  0.007  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1288  primosome, DnaD subunit  28.74 
 
 
272 aa  42  0.009  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.360467 
 
 
-
 
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