Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2622 |
Symbol | |
ID | 4204104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 2856571 |
End bp | 2857572 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642567172 |
Product | DNA replication protein DnaD, putative |
Protein accession | YP_699869 |
Protein GI | 110801687 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3935] Putative primosome component and related proteins |
TIGRFAM ID | [TIGR01446] DnaD and phage-associated domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTACTT TTATGTTAAA AAACTCAGCC ACTAAGTTTA CTCCTGTTAG TAATGTATTC CTAGAAGAAT ATATGCCTAA AGCTCGTGGA GAATTTATTA AGGTTTATTT ATTATTGCTA AAGTATAATT TCACTGGAGA ACCTGGAGTT AACTCTTCAA TTTTAGCAAC AAACTTAAAT CTTTTAGAAT CAGATATAAT GAATGCTCTT AATTATTGGC ATGACGAAGG TGTTATAAAA CTAGTTCCTA TAGATAAAAT GAATAACTTT AAAATAGAAT TTTTAGACTT ATCAGAAGGT AATCATTCAT CAAGTCAAAA CTCTGTTGAT TTATTATCAG CCCTTGATGA AAATAACACT AAGGATATGC TCAAAGATAT AGAAAAGCTT ATATGTCGTC CTTTATCCAC AAAGGAAATG ACAACTTATC TTTCTTGGCA AACAGAGCTT AATTTTTCCT CAGAGCTTAT ATTAATACTA ATAGAGTACT GTGTATCTAA GGGTAAAAAA GATGTTAGAT ACATAGAGAC AGTGGCTCTT GGATGGCATA ATGCCGGAAT AAAATCAATA GAGGAAGCTC AAGCTTATAT AACTAAAACA GAAGACAAAT GGGTTAAAAT AAGAAAAATT CTTAAGTATT TAGGAATTCA AAATACCGAA ATAATGAAGC CACAGGAAAC TATGATGGAA AAGTGGCTTT TAACTTATAA CTTCTCTGTT GAGTTAATAC TTAAGGCTTG CGATATATGC TTTGAACGTT TAAACAGAGC TGATTTTAAA TATATAGATG GTATCTTAGG TAAATGGTTT AAAGATGGTA TAAAGACTCT TGATGATGTA GCAAAAAAAG ATATTAAAAA GACATCTAGT ATTAAAAAAC CATTTAACAA AAATAATTCA GCTCCAATTC AAAAGAAACC AGCTAGAGAA GCAAACTTTA CCCAAAGAGA TTATGACTAT GATTCCTTAG AAAAACAATT GTTAGGATGG GATATTGAAT GA
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Protein sequence | MSTFMLKNSA TKFTPVSNVF LEEYMPKARG EFIKVYLLLL KYNFTGEPGV NSSILATNLN LLESDIMNAL NYWHDEGVIK LVPIDKMNNF KIEFLDLSEG NHSSSQNSVD LLSALDENNT KDMLKDIEKL ICRPLSTKEM TTYLSWQTEL NFSSELILIL IEYCVSKGKK DVRYIETVAL GWHNAGIKSI EEAQAYITKT EDKWVKIRKI LKYLGIQNTE IMKPQETMME KWLLTYNFSV ELILKACDIC FERLNRADFK YIDGILGKWF KDGIKTLDDV AKKDIKKTSS IKKPFNKNNS APIQKKPARE ANFTQRDYDY DSLEKQLLGW DIE
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