10 homologs were found in PanDaTox collection
for query gene Amir_6255 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_6255  hypothetical protein  100 
 
 
194 aa  377  1e-104  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0739  hypothetical protein  35.58 
 
 
220 aa  98.2  6e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  0.03285  n/a   
 
 
-
 
NC_009921  Franean1_5447  hypothetical protein  46.22 
 
 
222 aa  96.7  2e-19  Frankia sp. EAN1pec  Bacteria  normal  0.519979  normal  0.143037 
 
 
-
 
NC_013739  Cwoe_5412  hypothetical protein  36.36 
 
 
177 aa  56.6  0.0000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.336046  normal 
 
 
-
 
NC_013159  Svir_03420  hypothetical protein  37.5 
 
 
224 aa  54.7  0.0000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.151092  normal 
 
 
-
 
NC_013093  Amir_2470  hypothetical protein  35.96 
 
 
215 aa  50.4  0.00001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0554  peptidase C14, caspase catalytic subunit P20  29.82 
 
 
224 aa  50.1  0.00002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.210813  n/a   
 
 
-
 
NC_014210  Ndas_3561  hypothetical protein  32.96 
 
 
215 aa  48.9  0.00004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.732153 
 
 
-
 
NC_013124  Afer_0809  hypothetical protein  33.63 
 
 
220 aa  47  0.0002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.612305  n/a   
 
 
-
 
NC_009921  Franean1_3513  hypothetical protein  31.25 
 
 
251 aa  41.6  0.007  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>