25 homologs were found in PanDaTox collection
for query gene A9601_ffsVIMSS1309389 on replicon NC_008816
Organism: Prochlorococcus marinus str. AS9601



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009091  P9301_ffsVIMSS1309401  ffs 4.5S RNA component of the signal recognition particle (SRP)  100 
 
 		 81 bp  161  3e-38  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  1  n/a   
 
 
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NC_007577  PMT9312_R0034  SRP RNA  100 
 
 		 102 bp  161  3e-38  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
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NC_008816  A9601_ffsVIMSS1309389  4.5S RNA component of the signal recognition particle (SRP)  100 
 
 		 81 bp  161  3e-38  Prochlorococcus marinus str. AS9601  Bacteria  normal  1  n/a   
 
 
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NC_008817  P9515_ffsVIMSS1309395  4.5S RNA component of the signal recognition particle (SRP)  96.3 
 
 		 81 bp  137  4e-31  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  1  n/a   
 
 
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NC_009976  P9211_ffsVIMSS1309441  ffs 4.5S RNA component of the signal recognition particle (SRP)  89.71 
 
 		 101 bp  79.8  0.00000000000009  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  1  normal  1 
 
 
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NC_008820  P9303_ffsVIMSS1309425  4.5S RNA component of the signal recognition particle (SRP)  93.75 
 
 		 97 bp  71.9  0.00000000002  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.172921 
 
 
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NC_008819  NATL1_ffsVIMSS1309407  4.5S RNA component of the signal recognition particle (SRP)  93.75 
 
 		 97 bp  71.9  0.00000000002  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.42344  normal  1 
 
 
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NC_007413  Ava_R0054  SRP RNA; RNA component of signal recognitionparticle  92.16 
 
 		 102 bp  69.9  0.00000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
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NC_008312  Tery_R0010  SRP RNA; RNA component of signal recognition particle  93.62 
 
 		 102 bp  69.9  0.00000000008  Trichodesmium erythraeum IMS101  Bacteria  normal  0.204988  normal  1 
 
 
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NC_007335  PMN2A_R0016  SRP RNA; RNA component of signal recognitionparticle  91.67 
 
 		 101 bp  63.9  0.000000005  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.422508  n/a   
 
 
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NC_007516  Syncc9605_R0028  SRP RNA; RNA component of signal recognition particle  91.67 
 
 		 101 bp  63.9  0.000000005  Synechococcus sp. CC9605  Bacteria  normal  1  normal  0.0658959 
 
 
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NC_008025  Dgeo_R0056  SRP RNA; RNA component of signal recognition particle  91.49 
 
 		 106 bp  61.9  0.00000002  Deinococcus geothermalis DSM 11300  Bacteria  hitchhiker  0.0000625085  normal  0.583061 
 
 
-
 
NC_011729  PCC7424_R0031  SRP RNA; RNA component of signal recognitionparti cle  90.2 
 
 		 98 bp  61.9  0.00000002  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.000907546 
 
 
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NC_007947  Mfla_R0040  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 101 bp  50.1  0.00008  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000585528  hitchhiker  0.00000253455 
 
 
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NC_007794  Saro_R0021  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 92 bp  50.1  0.00008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.132266  n/a   
 
 
-
 
NC_007614  Nmul_AR0033  4.5S ribosomal RNA component of signal recognition particle (SRP)  93.75 
 
 		 104 bp  48.1  0.0003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.898057  n/a   
 
 
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NC_007298  Daro_R0032  SRP RNA, RNA component of signal recognition particle  93.75 
 
 		 101 bp  48.1  0.0003  Dechloromonas aromatica RCB  Bacteria  normal  0.116447  unclonable  0.0000000450156 
 
 
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NC_011662  Tmz1t_R0010  SRP RNA; RNA component of signal recognitionparti cle  93.75 
 
 		 106 bp  48.1  0.0003  Thauera sp. MZ1T  Bacteria  normal  0.33139  n/a   
 
 
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NC_011726  PCC8801_R0017  SRP RNA; RNA component of signal recognitionparticle  86.27 
 
 		 98 bp  46.1  0.001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
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NC_013161  Cyan8802_R0016  SRP RNA; RNA component of signal recognition particle  86.27 
 
 		 98 bp  46.1  0.001  Cyanothece sp. PCC 8802  Bacteria  normal  0.629048  normal  0.151745 
 
 
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NC_007604  Synpcc7942_R0047  SRP RNA  100 
 
 		 101 bp  44.1  0.005  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.144532 
 
 
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NC_009512  Pput_R0047  SRP RNA; RNA component of signal recognition particle  93.33 
 
 		 117 bp  44.1  0.005  Pseudomonas putida F1  Bacteria  normal  1  normal  0.0796172 
 
 
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NC_010322  PputGB1_R0076  SRP RNA; RNA component of signal recognition particle  93.33 
 
 		 117 bp  44.1  0.005  Pseudomonas putida GB-1  Bacteria  normal  0.341917  normal  0.494502 
 
 
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NC_010483  TRQ2_R0052  SRP RNA; RNA component of signal recognition particle  93.33 
 
 		 105 bp  44.1  0.005  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
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NC_010501  PputW619_R0058    93.33 
 
 		 117 bp  44.1  0.005  Pseudomonas putida W619  Bacteria  normal  0.334367  normal  1 
 
 
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