15 homologs were found in PanDaTox collection
for query gene Synpcc7942_R0047 on replicon NC_007604
Organism: Synechococcus elongatus PCC 7942



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007604  Synpcc7942_R0047  SRP RNA  100 
 
 		 101 bp  200  5e-50  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.144532 
 
 
-
 
NC_011726  PCC8801_R0017  SRP RNA; RNA component of signal recognitionparticle  88.89 
 
 		 98 bp  99.6  1e-19  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_R0016  SRP RNA; RNA component of signal recognition particle  88.89 
 
 		 98 bp  99.6  1e-19  Cyanothece sp. PCC 8802  Bacteria  normal  0.629048  normal  0.151745 
 
 
-
 
NC_011729  PCC7424_R0031  SRP RNA; RNA component of signal recognitionparti cle  91.78 
 
 		 98 bp  97.6  5e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.000907546 
 
 
-
 
NC_011884  Cyan7425_R0038  SRP RNA; RNA component of signal recognitionparti cle  86.08 
 
 		 100 bp  69.9  0.0000000001  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008312  Tery_R0010  SRP RNA; RNA component of signal recognition particle  88.71 
 
 		 102 bp  67.9  0.0000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  0.204988  normal  1 
 
 
-
 
NC_008820  P9303_ffsVIMSS1309425  4.5S RNA component of the signal recognition particle (SRP)  86.49 
 
 		 97 bp  67.9  0.0000000004  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.172921 
 
 
-
 
NC_007335  PMN2A_R0016  SRP RNA; RNA component of signal recognitionparticle  86.89 
 
 		 101 bp  58  0.0000004  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.422508  n/a   
 
 
-
 
NC_007413  Ava_R0054  SRP RNA; RNA component of signal recognitionparticle  84.93 
 
 		 102 bp  58  0.0000004  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008819  NATL1_ffsVIMSS1309407  4.5S RNA component of the signal recognition particle (SRP)  86.89 
 
 		 97 bp  58  0.0000004  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.42344  normal  1 
 
 
-
 
NC_009976  P9211_ffsVIMSS1309441  ffs 4.5S RNA component of the signal recognition particle (SRP)  85.25 
 
 		 101 bp  50.1  0.0001  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007516  Syncc9605_R0028  SRP RNA; RNA component of signal recognition particle  87.5 
 
 		 101 bp  48.1  0.0004  Synechococcus sp. CC9605  Bacteria  normal  1  normal  0.0658959 
 
 
-
 
NC_007577  PMT9312_R0034  SRP RNA  100 
 
 		 102 bp  44.1  0.006  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_008816  A9601_ffsVIMSS1309389  4.5S RNA component of the signal recognition particle (SRP)  100 
 
 		 81 bp  44.1  0.006  Prochlorococcus marinus str. AS9601  Bacteria  normal  1  n/a   
 
 
-
 
NC_009091  P9301_ffsVIMSS1309401  ffs 4.5S RNA component of the signal recognition particle (SRP)  100 
 
 		 81 bp  44.1  0.006  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>