17 homologs were found in PanDaTox collection
for query gene PMN2A_R0016 on replicon NC_007335
Organism: Prochlorococcus marinus str. NATL2A



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007335  PMN2A_R0016  SRP RNA; RNA component of signal recognitionparticle  100 
 
 		 101 bp  200  5e-50  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.422508  n/a   
 
 
-
 
NC_008819  NATL1_ffsVIMSS1309407  4.5S RNA component of the signal recognition particle (SRP)  98.97 
 
 		 97 bp  184  3e-45  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.42344  normal  1 
 
 
-
 
NC_009976  P9211_ffsVIMSS1309441  ffs 4.5S RNA component of the signal recognition particle (SRP)  89.8 
 
 		 101 bp  115  2.0000000000000002e-24  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008820  P9303_ffsVIMSS1309425  4.5S RNA component of the signal recognition particle (SRP)  89.69 
 
 		 97 bp  113  8.000000000000001e-24  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.172921 
 
 
-
 
NC_007516  Syncc9605_R0028  SRP RNA; RNA component of signal recognition particle  89.36 
 
 		 101 bp  107  5e-22  Synechococcus sp. CC9605  Bacteria  normal  1  normal  0.0658959 
 
 
-
 
NC_008312  Tery_R0010  SRP RNA; RNA component of signal recognition particle  88.71 
 
 		 102 bp  67.9  0.0000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  0.204988  normal  1 
 
 
-
 
NC_007577  PMT9312_R0034  SRP RNA  91.67 
 
 		 102 bp  63.9  0.000000007  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_008816  A9601_ffsVIMSS1309389  4.5S RNA component of the signal recognition particle (SRP)  91.67 
 
 		 81 bp  63.9  0.000000007  Prochlorococcus marinus str. AS9601  Bacteria  normal  1  n/a   
 
 
-
 
NC_009091  P9301_ffsVIMSS1309401  ffs 4.5S RNA component of the signal recognition particle (SRP)  91.67 
 
 		 81 bp  63.9  0.000000007  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_R0031  SRP RNA; RNA component of signal recognitionparti cle  97.14 
 
 		 98 bp  61.9  0.00000003  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.000907546 
 
 
-
 
NC_013161  Cyan8802_R0016  SRP RNA; RNA component of signal recognition particle  92.86 
 
 		 98 bp  60  0.0000001  Cyanothece sp. PCC 8802  Bacteria  normal  0.629048  normal  0.151745 
 
 
-
 
NC_011726  PCC8801_R0017  SRP RNA; RNA component of signal recognitionparticle  92.86 
 
 		 98 bp  60  0.0000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_R0047  SRP RNA  86.89 
 
 		 101 bp  58  0.0000004  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.144532 
 
 
-
 
NC_008817  P9515_ffsVIMSS1309395  4.5S RNA component of the signal recognition particle (SRP)  92.11 
 
 		 81 bp  52  0.00003  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_R0054  SRP RNA; RNA component of signal recognitionparticle  87.5 
 
 		 102 bp  48.1  0.0004  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_R0038  SRP RNA; RNA component of signal recognitionparti cle  91.43 
 
 		 100 bp  46.1  0.002  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_R0044  SRP RNA; RNA component of signal recognition particle  93.33 
 
 		 117 bp  44.1  0.006  Marinomonas sp. MWYL1  Bacteria  normal  0.577692  normal  0.0469682 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>