6 homologs were found in PanDaTox collection
for query gene Rsph17025_0075 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_0075    100 
 
 
357 bp  708    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.186564  normal 
 
 
-
 
NC_009049  Rsph17029_2623  inner membrane protein  94.12 
 
 
396 bp  541  9.999999999999999e-153  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0963  inner membrane protein  93.84 
 
 
396 bp  533  1e-149  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.625871  n/a   
 
 
-
 
NC_009952  Dshi_2885  hypothetical protein  87.67 
 
 
390 bp  73.8  0.00000000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.241636  normal  0.197361 
 
 
-
 
NC_008043  TM1040_3506  inner membrane protein  91.89 
 
 
411 bp  50.1  0.0004  Ruegeria sp. TM1040  Bacteria  normal  0.701287  normal  0.583809 
 
 
-
 
NC_008686  Pden_0552  inner membrane protein  96.55 
 
 
393 bp  50.1  0.0004  Paracoccus denitrificans PD1222  Bacteria  normal  0.642383  normal 
 
 
-
 
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