Gene Dshi_2885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2885 
Symbol 
ID5710736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3041239 
End bp3041628 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content64% 
IMG OID641268811 
Producthypothetical protein 
Protein accessionYP_001534219 
Protein GI159045425 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.241636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.197361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG AACTTACCGT CCTCGCCCTC GCCGCCCTGC TCCAGGTCGT GCAATTCATC 
CTCTACTCGG TCGCCGCCAA TATCCAGGTG GGCCCCAAAC GCGCCATGAG CCCAAGGGAC
GAACCGATCG TTTTGACCGG CCTTGCGGGA CGGCTGCAGC GCGCGATGAA CAATCATTTC
GAGGGGCTCA CCCTCTTCAC CATCGCGGTG GTCGTCGTCA CCCTCTCGGA TCAGTCCACC
CCGTTCACCG CGCTCTGCGC CCATGCCTAC CTGATCGCGC GCATCCTCTA TGTGCCCGCC
TATGCCCAGG GCCTCGCCCC CTGGCGATCC GTCATCTGGA TGGTCGGCTT CATCGCCACC
GTGGTCATGC TGCTCTCGGC CCTTCTGTGA
 
Protein sequence
MTTELTVLAL AALLQVVQFI LYSVAANIQV GPKRAMSPRD EPIVLTGLAG RLQRAMNNHF 
EGLTLFTIAV VVVTLSDQST PFTALCAHAY LIARILYVPA YAQGLAPWRS VIWMVGFIAT
VVMLLSALL