11 homologs were found in PanDaTox collection
for query gene Rru_B0041 on replicon NC_007641
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007641  Rru_B0041  XRE family transcriptional regulator  100 
 
 
103 aa  216  8e-56  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0601255  n/a   
 
 
-
 
NC_010725  Mpop_0269  transcriptional regulator, XRE family  58.76 
 
 
98 aa  127  8e-29  Methylobacterium populi BJ001  Bacteria  normal  0.75294  normal 
 
 
-
 
NC_010511  M446_1273  XRE family transcriptional regulator  57.73 
 
 
103 aa  126  1e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.31863  normal  0.4589 
 
 
-
 
NC_010172  Mext_1160  helix-turn-helix domain-containing protein  58.76 
 
 
98 aa  125  2e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.476577 
 
 
-
 
NC_011757  Mchl_1320  transcriptional regulator, XRE family  58.76 
 
 
98 aa  125  2e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_5908  XRE family transcriptional regulator  56.7 
 
 
108 aa  125  3e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.209414  hitchhiker  0.00928486 
 
 
-
 
NC_011887  Mnod_8001  transcriptional regulator, XRE family  56.7 
 
 
118 aa  124  6e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008042  TM1040_3842  XRE family transcriptional regulator  56.79 
 
 
100 aa  108  3e-23  Ruegeria sp. TM1040  Bacteria  normal  normal  0.039108 
 
 
-
 
NC_012791  Vapar_2697  transcriptional regulator, XRE family  36.78 
 
 
126 aa  66.2  2e-10  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_06770  predicted transcriptional regulator  30.93 
 
 
106 aa  45.4  0.0003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0650  transcriptional regulator, XRE family  47.62 
 
 
110 aa  44.7  0.0005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
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