13 homologs were found in PanDaTox collection
for query gene Pnap_0062 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_0062  hypothetical protein  100 
 
 
139 aa  279  1e-74  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.506925  normal  0.544054 
 
 
-
 
NC_008554  Sfum_0407  hypothetical protein  41.35 
 
 
165 aa  98.2  3e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.337339  normal 
 
 
-
 
NC_009943  Dole_1902  hypothetical protein  34.07 
 
 
137 aa  84.7  4e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00660694  n/a   
 
 
-
 
NC_011206  Lferr_0088  hypothetical protein  30.83 
 
 
137 aa  60.8  0.000000005  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.713807  normal 
 
 
-
 
NC_011761  AFE_0086  hypothetical protein  30.83 
 
 
137 aa  60.8  0.000000005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2717  hypothetical protein  33.64 
 
 
140 aa  48.1  0.00004  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0890  hypothetical protein  32.64 
 
 
148 aa  46.2  0.0002  Meiothermus ruber DSM 1279  Bacteria  normal  0.416652  normal 
 
 
-
 
NC_013385  Adeg_0262  PilT protein domain protein  27.78 
 
 
151 aa  43.9  0.0007  Ammonifex degensii KC4  Bacteria  normal  0.423377  n/a   
 
 
-
 
NC_007413  Ava_4992  hypothetical protein  28.38 
 
 
154 aa  42.4  0.002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0381  hypothetical protein  21.28 
 
 
147 aa  42  0.003  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.0818688 
 
 
-
 
NC_007404  Tbd_0894  hypothetical protein  30.07 
 
 
143 aa  41.2  0.005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1709  PilT domain-containing protein  26.57 
 
 
147 aa  41.2  0.005  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.567805  n/a   
 
 
-
 
NC_013947  Snas_1444  hypothetical protein  28.47 
 
 
145 aa  40.4  0.007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
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