Gene Sfum_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0407 
Symbol 
ID4461009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp488459 
End bp488956 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content57% 
IMG OID639701162 
Producthypothetical protein 
Protein accessionYP_844542 
Protein GI116747855 
COG category[R] General function prediction only 
COG ID[COG4113] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.337339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAACGG GAAGGCCCAC GGCTGACTGT TCCGGGCCTG TCGCTCAGCC GGGAAATTCT 
GAAGGACCGG GCGGAATCCG ACACATGAAA GTCTTCTTTG ACACCTCCGC GTTCGTCAAG
AGGTACGTCG AGGAACCCGG GACGGAGAAG GTTCTCGAGA TATGCGACAA GGCGGATCAA
CTGGTTCTTT GCGTCATTTG CCTTCCCGAA ATGATTTCCA CGCTCAACCG GCTCGTTCGC
GAAGGCAGGC TGCAAAACGA CGAATATCGG AAGCTGCGGG ACCTCGTTTT GGAGGAAATC
GAAGACGCCG AAATCTGCTT CCTCACCCCC GAGGTCGTCG CTCAAACGAT AAAGTGCCTT
GAAAGCAACG TGCTGCGCGC CATGGACGCG CTTCATCTCG GATGCGCCCT CGTCGTTGAG
CCGGACCTGT TCGTGTCTTC CGATCGACGG CAACTTGAAG CCGCCAGAAG AGCGGGCTTG
AAGGTCATGG AAGCGTGA
 
Protein sequence
METGRPTADC SGPVAQPGNS EGPGGIRHMK VFFDTSAFVK RYVEEPGTEK VLEICDKADQ 
LVLCVICLPE MISTLNRLVR EGRLQNDEYR KLRDLVLEEI EDAEICFLTP EVVAQTIKCL
ESNVLRAMDA LHLGCALVVE PDLFVSSDRR QLEAARRAGL KVMEA