Gene Daud_1709 details

Gene Information

• Locus tag: Daud_1709
• ID: 6026986
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 1799954
• End bp: 1800397
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641594529
• Product: PilT domain-containing protein
• Protein accession: YP_001717840
• Protein GI: 169831858
• COG category: [R] General function prediction only
• COG ID: [COG4113] Predicted nucleic acid-binding protein, contains PIN domain

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.567805
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACAAG GCTACTTTCT CGACACCAGC GTCCTCTTCA AGCGCTATAT CATCGAAACA 
GGTTCCGAGG CCGTCAACCG GTTGTTTGAT TCTGAGAAAG AACCCCTCCT CTTCATCTCT 
ACAGTTACTC TTCCGGAAGT GATCTCCAAT CTGCGCCGGC TGGTTGACGT GGACGAAGTG 
CTTACAGAAG AGGAATTTAT GGCTCTGAAA GCCACGTTCC TGGGTGATAT CGGGGACGGA 
CTCCTGGAAC TTGTCGAACT GACCCCGGAC ATCCTCTTGC ACAGCCTGGA GATACTTTCC 
CGGCAATATG TCACGCCGCT GGACGCCATT CAGCTCGCTT CCGCCCTGTC CCTGCCCGAA 
AAACCGGTTT TTGTTTGCGC TGACCAAAAA CTGTCGCGCC TGGCCGGGGA ATACGGGCTG 
CCCGTTCTCG AACCCGCGCA CTGA 

 

Protein sequence

MTQGYFLDTS VLFKRYIIET GSEAVNRLFD SEKEPLLFIS TVTLPEVISN LRRLVDVDEV 
LTEEEFMALK ATFLGDIGDG LLELVELTPD ILLHSLEILS RQYVTPLDAI QLASALSLPE 
KPVFVCADQK LSRLAGEYGL PVLEPAH