202 homologs were found in PanDaTox collection
for query gene Mext_0090 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_0090  transcriptional regulator protein-like protein  100 
 
 
125 aa  251  2e-66  Methylobacterium extorquens PA1  Bacteria  normal  0.21436  normal 
 
 
-
 
NC_010172  Mext_0170  ROSMUCR transcriptional regulator  81.82 
 
 
186 aa  113  9e-25  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0082  transcriptional regulator, MucR family  81.82 
 
 
197 aa  113  1e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.288227  normal 
 
 
-
 
NC_010505  Mrad2831_0075  MucR family transcriptional regulator  73.77 
 
 
166 aa  95.5  2e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1029  MucR family transcriptional regulator  70.49 
 
 
146 aa  92.4  2e-18  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4988  transcriptional regulator, MucR family  70.49 
 
 
177 aa  92  2e-18  Methylobacterium populi BJ001  Bacteria  normal  0.103901  normal  0.173335 
 
 
-
 
NC_010505  Mrad2831_1517  MucR family transcriptional regulator  72.13 
 
 
160 aa  91.7  3e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.400145  normal  0.0460522 
 
 
-
 
NC_010518  Mrad2831_6452  MucR family transcriptional regulator  69.49 
 
 
151 aa  92  3e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_011894  Mnod_2474  transcriptional regulator, MucR family  67.21 
 
 
168 aa  91.7  3e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4474  ROSMUCR transcriptional regulator  68.85 
 
 
176 aa  92  3e-18  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4938  transcriptional regulator, MucR family  68.85 
 
 
176 aa  92  3e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.686756  normal  0.493177 
 
 
-
 
NC_011892  Mnod_8284  transcriptional regulator, MucR family  67.19 
 
 
143 aa  89.7  1e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.647815  n/a   
 
 
-
 
NC_011894  Mnod_2365  transcriptional regulator, MucR family  62.32 
 
 
176 aa  89.7  1e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7194  transcriptional regulator, MucR family  67.21 
 
 
145 aa  89.4  1e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6298  MucR family transcriptional regulator  67.21 
 
 
142 aa  89  2e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0539112 
 
 
-
 
NC_010502  Mrad2831_6475  MucR family transcriptional regulator  70.18 
 
 
134 aa  89  2e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_3684  transcriptional regulator, MucR family  55.26 
 
 
162 aa  89  2e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6343  transcriptional regulator, MucR family  67.21 
 
 
189 aa  89  2e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010518  Mrad2831_6439  MucR family transcriptional regulator  66.67 
 
 
151 aa  88.2  3e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_011894  Mnod_5073  transcriptional regulator, MucR family  66.67 
 
 
139 aa  88.2  3e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010517  Mrad2831_6424  MucR family transcriptional regulator  67.8 
 
 
147 aa  88.6  3e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal  0.537554 
 
 
-
 
NC_011894  Mnod_7625  transcriptional regulator, MucR family  67.8 
 
 
166 aa  88.2  4e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_8232  transcriptional regulator, MucR family  66.67 
 
 
150 aa  87.8  5e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0643273  n/a   
 
 
-
 
NC_011894  Mnod_3504  transcriptional regulator, MucR family  63.93 
 
 
131 aa  87.4  5e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0608  MucR family transcriptional regulator  65.57 
 
 
166 aa  87.4  6e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0460505 
 
 
-
 
NC_010514  Mrad2831_6382  MucR family transcriptional regulator  70.91 
 
 
151 aa  87  7e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_010517  Mrad2831_6412  MucR family transcriptional regulator  70.91 
 
 
151 aa  87  7e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_011893  Mnod_8789  transcriptional regulator, MucR family  66.13 
 
 
147 aa  87  8e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.292559  n/a   
 
 
-
 
NC_011894  Mnod_0068  transcriptional regulator, MucR family  64.41 
 
 
174 aa  87  9e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3845  transcriptional regulator, MucR family  66.67 
 
 
135 aa  86.7  9e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.581929  n/a   
 
 
-
 
NC_011894  Mnod_2620  transcriptional regulator, MucR family  61.67 
 
 
140 aa  86.3  1e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.297322  n/a   
 
 
-
 
NC_011894  Mnod_2468  transcriptional regulator, MucR family  62.3 
 
 
165 aa  86.3  1e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8754  transcriptional regulator, MucR family  63.93 
 
 
143 aa  86.3  1e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.17166  n/a   
 
 
-
 
NC_010505  Mrad2831_3386  MucR family transcriptional regulator  67.86 
 
 
135 aa  86.7  1e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0319872 
 
 
-
 
NC_011894  Mnod_7402  transcriptional regulator, MucR family  63.93 
 
 
133 aa  86.3  1e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.169134  n/a   
 
 
-
 
NC_010511  M446_6899  MucR family transcriptional regulator  63.33 
 
 
164 aa  86.3  1e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.106465  normal 
 
 
-
 
NC_010511  M446_4944  MucR family transcriptional regulator  65.57 
 
 
158 aa  85.9  1e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3787  ROSMUCR transcriptional regulator  67.21 
 
 
140 aa  85.9  2e-16  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1006  MucR family transcriptional regulator  63.93 
 
 
144 aa  85.5  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5626  transcriptional regulator, MucR family  63.93 
 
 
133 aa  85.5  2e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.63695  n/a   
 
 
-
 
NC_010511  M446_4097  MucR family transcriptional regulator  66.67 
 
 
143 aa  85.9  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.812633 
 
 
-
 
NC_011892  Mnod_8753  transcriptional regulator, MucR family  62.3 
 
 
175 aa  85.9  2e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.286217  n/a   
 
 
-
 
NC_011894  Mnod_3505  transcriptional regulator, MucR family  56.72 
 
 
174 aa  85.5  2e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1667  MucR family transcriptional regulator  63.33 
 
 
142 aa  85.9  2e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00662721 
 
 
-
 
NC_011894  Mnod_3559  transcriptional regulator, MucR family  66.67 
 
 
144 aa  85.9  2e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6580  MucR family transcriptional regulator  63.93 
 
 
133 aa  85.5  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0358165 
 
 
-
 
NC_011894  Mnod_6541  transcriptional regulator, MucR family  63.33 
 
 
144 aa  85.1  3e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2484  transcriptional regulator, MucR family  68.85 
 
 
134 aa  85.1  3e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.281768  n/a   
 
 
-
 
NC_010511  M446_5932  MucR family transcriptional regulator  63.33 
 
 
145 aa  84.7  4e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.54766 
 
 
-
 
NC_010511  M446_5185  MucR family transcriptional regulator  64.41 
 
 
185 aa  84.7  4e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.238338  normal  0.0253848 
 
 
-
 
NC_011758  Mchl_5566  transcriptional regulator, MucR family  67.24 
 
 
324 aa  84.7  4e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.015516  normal  0.150119 
 
 
-
 
NC_011894  Mnod_6579  transcriptional regulator, MucR family  63.49 
 
 
166 aa  84.7  4e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3868  MucR family transcriptional regulator  61.67 
 
 
146 aa  84.3  5e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.169136  normal  0.538418 
 
 
-
 
NC_011894  Mnod_2999  transcriptional regulator, MucR family  63.33 
 
 
134 aa  84.3  5e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5627  transcriptional regulator, MucR family  56.72 
 
 
174 aa  84.3  5e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.698408  n/a   
 
 
-
 
NC_010511  M446_1890  MucR family transcriptional regulator  62.3 
 
 
143 aa  84  6e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1838  MucR family transcriptional regulator  59.68 
 
 
155 aa  84  6e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0743894  normal  0.315346 
 
 
-
 
NC_010511  M446_6739  MucR family transcriptional regulator  62.3 
 
 
164 aa  84  7e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.055135 
 
 
-
 
NC_011887  Mnod_7826  transcriptional regulator, MucR family  58.21 
 
 
174 aa  83.6  8e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4973  transcriptional regulator, MucR family  64.41 
 
 
160 aa  83.6  9e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0065  MucR family transcriptional regulator  63.93 
 
 
133 aa  82.8  1e-15  Methylobacterium sp. 4-46  Bacteria  normal  0.126654  normal  0.420331 
 
 
-
 
NC_010511  M446_3346  MucR family transcriptional regulator  48.78 
 
 
163 aa  82.8  1e-15  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4730  MucR family transcriptional regulator  59.02 
 
 
145 aa  83.2  1e-15  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4669  MucR family transcriptional regulator  63.93 
 
 
169 aa  83.2  1e-15  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1282  transcriptional regulator, MucR family  71.15 
 
 
148 aa  83.2  1e-15  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.135766  n/a   
 
 
-
 
NC_011894  Mnod_1559  transcriptional regulator, MucR family  64.41 
 
 
164 aa  83.2  1e-15  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.192096  n/a   
 
 
-
 
NC_010338  Caul_1341  MucR family transcriptional regulator  66.1 
 
 
142 aa  83.2  1e-15  Caulobacter sp. K31  Bacteria  normal  0.272746  normal 
 
 
-
 
NC_011757  Mchl_4927  transcriptional regulator, MucR family  53.25 
 
 
177 aa  82  2e-15  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.971725 
 
 
-
 
NC_011757  Mchl_1610  transcriptional regulator, MucR family  61.02 
 
 
145 aa  82.4  2e-15  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4463  ROSMUCR transcriptional regulator  53.25 
 
 
177 aa  82  2e-15  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2842  MucR family transcriptional regulator  59.68 
 
 
139 aa  82.4  2e-15  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.840232 
 
 
-
 
NC_011758  Mchl_5531  transcriptional regulator, MucR family  51.19 
 
 
170 aa  82.4  2e-15  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0316462 
 
 
-
 
NC_010511  M446_6603  MucR family transcriptional regulator  63.93 
 
 
171 aa  82.8  2e-15  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.108608 
 
 
-
 
NC_011894  Mnod_4660  transcriptional regulator, MucR family  65 
 
 
139 aa  82.4  2e-15  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.20016  n/a   
 
 
-
 
NC_010725  Mpop_4977  transcriptional regulator, MucR family  48.94 
 
 
178 aa  82.4  2e-15  Methylobacterium populi BJ001  Bacteria  normal  0.443589  normal  0.0364251 
 
 
-
 
NC_011894  Mnod_5483  transcriptional regulator, MucR family  68.97 
 
 
147 aa  82  2e-15  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.596779  n/a   
 
 
-
 
NC_010511  M446_6743  MucR family transcriptional regulator  60.66 
 
 
156 aa  82.4  2e-15  Methylobacterium sp. 4-46  Bacteria  normal  0.328928  normal  0.300512 
 
 
-
 
NC_010511  M446_6742  MucR family transcriptional regulator  62.3 
 
 
143 aa  82.4  2e-15  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0991744 
 
 
-
 
NC_009507  Swit_5190  MucR family transcriptional regulator  57.81 
 
 
308 aa  81.6  3e-15  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.533774 
 
 
-
 
NC_010172  Mext_2834  ROSMUCR transcriptional regulator  62.71 
 
 
162 aa  81.6  3e-15  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3060  transcriptional regulator, MucR family  62.71 
 
 
162 aa  81.6  3e-15  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2952  transcriptional regulator, MucR family  57.35 
 
 
160 aa  81.6  3e-15  Methylobacterium populi BJ001  Bacteria  normal  0.324392  normal 
 
 
-
 
NC_011894  Mnod_3011  transcriptional regulator, MucR family  65.57 
 
 
173 aa  81.6  3e-15  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5564  MucR family transcriptional regulator  60.66 
 
 
156 aa  81.6  3e-15  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2091  transcriptional regulator, MucR family  63.79 
 
 
162 aa  82  3e-15  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1917  MucR family transcriptional regulator  59.32 
 
 
155 aa  81.6  3e-15  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00617241 
 
 
-
 
NC_010505  Mrad2831_3293  MucR family transcriptional regulator  67.31 
 
 
141 aa  81.6  3e-15  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4375  MucR family transcriptional regulator  57.14 
 
 
150 aa  82  3e-15  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6054  MucR family transcriptional regulator  64.41 
 
 
159 aa  81.3  4e-15  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0276  MucR family transcriptional regulator  67.24 
 
 
151 aa  81.3  4e-15  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0114545 
 
 
-
 
NC_011004  Rpal_2057  transcriptional regulator, MucR family  58.06 
 
 
138 aa  81.3  4e-15  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0549  transcriptional regulator, MucR family  63.33 
 
 
147 aa  81.3  4e-15  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.973698  n/a   
 
 
-
 
NC_010505  Mrad2831_4324  MucR family transcriptional regulator  61.02 
 
 
179 aa  80.9  5e-15  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0666853 
 
 
-
 
NC_010511  M446_1153  MucR family transcriptional regulator  60.66 
 
 
174 aa  81.3  5e-15  Methylobacterium sp. 4-46  Bacteria  normal  0.877039  normal 
 
 
-
 
NC_011894  Mnod_0124  transcriptional regulator, MucR family  56.76 
 
 
137 aa  80.9  5e-15  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.376819  n/a   
 
 
-
 
NC_010511  M446_5488  MucR family transcriptional regulator  62.07 
 
 
158 aa  80.5  6e-15  Methylobacterium sp. 4-46  Bacteria  normal  0.622801  normal  0.0617685 
 
 
-
 
NC_011894  Mnod_1808  transcriptional regulator, MucR family  61.02 
 
 
160 aa  80.9  6e-15  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6164  MucR family transcriptional regulator  62.3 
 
 
174 aa  80.9  6e-15  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3519  MucR family transcriptional regulator  58.06 
 
 
139 aa  80.5  7e-15  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.409098  normal  0.722255 
 
 
-
 
NC_010511  M446_1889  MucR family transcriptional regulator  60.66 
 
 
156 aa  80.5  7e-15  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
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