7 homologs were found in PanDaTox collection
for query gene Dfer_0028 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_0028  hypothetical protein  100 
 
 
543 aa  1128    Dyadobacter fermentans DSM 18053  Bacteria  unclonable  0.0000000000206462  normal  0.317386 
 
 
-
 
NC_013730  Slin_2248  hypothetical protein  49.07 
 
 
549 aa  508  9.999999999999999e-143  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2561  hypothetical protein  27.61 
 
 
540 aa  72.4  0.00000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.545295 
 
 
-
 
NC_013132  Cpin_6753  hypothetical protein  27.5 
 
 
876 aa  45.4  0.002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.21551  normal 
 
 
-
 
NC_013061  Phep_1683  hypothetical protein  28.26 
 
 
165 aa  44.7  0.004  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.942243 
 
 
-
 
NC_013730  Slin_5389  hypothetical protein  28.45 
 
 
274 aa  44.3  0.006  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_04140  metalloprotease, putative  35.63 
 
 
887 aa  44.3  0.006  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.700995  n/a   
 
 
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