Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2561 |
Symbol | |
ID | 8726306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3096151 |
End bp | 3097773 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003387378 |
Protein GI | 284037448 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.545295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTAG TTGCAGTAGG CCTGGCAATC AGCCTGGCGG GTGCCGGTTA TTGGTATTGG CAGTCGACCG GCTCCCCGGC CGTGGCGGCT GTGCAGTTAC AAGGACCTTT ACCGGCGCAA ACGTCGCTTT CTCCTACGCC CCGCACTCAG TTCACCCCCA CACCCAGTAC TCGAAAAGGG TATTACAATC TGGATGTTGT TGGCGATTTT ACTTTGCCAG CGACAAAAAC CATTACGTTT TGTGGAGCGG GACGAAACCT TCACGTTCAG AAAGATCCTA CGAAAATCTT TCGGCGAGGG TTCTCAGCCG TTGATCAAAG CAGGATGGTG CCCAACGTCG AAATCTGGAA AGATGGCTTT CCTGCGAATG GCTGGAAAAG TTCACTTCAG ACCAGTCAGC GGTCGGTCAT TCTCTATCAA AACTACTTCA GAGATTCGTT TGGTTTGGCC TGGGCACAAA ACAGCGATAA GGCAAATGAG ACACTCTACC GCGCAGTTCC CAGCGGCAAC GCTGCCGGAG CGGCTCGCCC TATCAATCGA AATACCCTGT ATCAGGCCTG TGCGGAACTG AGCGGAGGGT GTTTTGGTTT CGGCGATTGC CCGCCCAGCG GCATGAAAAG CACGTACGGG TTTATTTTCC TGGATATTGA GAACGATGGT GCCAACATGA CCAATCGGCA GGAACAAGCC AACCTGTACA CCTACATGAT CAAGACGATC AAGGAAAACG TTAGTCCACA AACGCAGGTT GGGTCTATTG CGCCGGTTTT GCACAACAGC GTTGGTTATT CAAAAGCTGA CGATTATAAA GCCACTCCCG ACTGGCTCTG GGCAACAACC GCTCAGCACA CGGCTACCAG CCGCCAGCGA GGTATGCCGA ACGATATAGT TGGCAAATCG TTCGGTGACT ACGCTGATTT TCAGATGCCC GGTACGTATT ACGCCTTCCC TGACTTTGAC TACTCAATCC GGCATAACGG AGACAACAGC CGACATTGGC TGGCGTCTTT ACTGGGCGAG CAGGAAGTCA ACATGAAGTT GTCGCCAAAG AAGCGGATAG CCTGGCAATG GCTGTTCAAT ACCCAGAGCG AACTTCCGAA CAGCAGTAAA GCGGAACACG CAACTCCCCC CGTCGTGGCC GAGGGCATGG GCATCTTTTA CTGGTTCACC GGAGCCTACG GCGTATTATT CTGGGATGAT CATCAGGACC TGGTACCCGA TTCGCCCCCG CCCGCCGATC CGAGCCAGAA AGGACTAGGC AATGATCGGA ATTATGCCTG CTATGAACAC TATGTTCACG GACTCTGGCG GCTATTCAAG CATCACGGCG ATTTGTTCAA TGGACGGGAG ACCTATCTTA ATGAATCGAC GGAATGTTCC TACGACGGTG GGCAAACGTG GTATAAATAC AATGCCAACC AACTCAAAGT GCGTGATTTG CCCGTTGTTC GTGCCATTGT CAACGGCAAT CAGGTTCTGG TAGCGGCTAC CAAAGCCTAC GCCCAACCCA ATCAGATGAG CCGGGTCATG ATGCGGTATG TGCAGAACGG CTTTAACTTT TATACGACCA TTACCCTGAA AGGTGACGAA ATTTACCTGG GCCGAGCTAC CATGAACCGG TGA
|
Protein sequence | MKLVAVGLAI SLAGAGYWYW QSTGSPAVAA VQLQGPLPAQ TSLSPTPRTQ FTPTPSTRKG YYNLDVVGDF TLPATKTITF CGAGRNLHVQ KDPTKIFRRG FSAVDQSRMV PNVEIWKDGF PANGWKSSLQ TSQRSVILYQ NYFRDSFGLA WAQNSDKANE TLYRAVPSGN AAGAARPINR NTLYQACAEL SGGCFGFGDC PPSGMKSTYG FIFLDIENDG ANMTNRQEQA NLYTYMIKTI KENVSPQTQV GSIAPVLHNS VGYSKADDYK ATPDWLWATT AQHTATSRQR GMPNDIVGKS FGDYADFQMP GTYYAFPDFD YSIRHNGDNS RHWLASLLGE QEVNMKLSPK KRIAWQWLFN TQSELPNSSK AEHATPPVVA EGMGIFYWFT GAYGVLFWDD HQDLVPDSPP PADPSQKGLG NDRNYACYEH YVHGLWRLFK HHGDLFNGRE TYLNESTECS YDGGQTWYKY NANQLKVRDL PVVRAIVNGN QVLVAATKAY AQPNQMSRVM MRYVQNGFNF YTTITLKGDE IYLGRATMNR
|
| |