Gene Slin_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2561 
Symbol 
ID8726306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3096151 
End bp3097773 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387378 
Protein GI284037448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.545295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAG TTGCAGTAGG CCTGGCAATC AGCCTGGCGG GTGCCGGTTA TTGGTATTGG 
CAGTCGACCG GCTCCCCGGC CGTGGCGGCT GTGCAGTTAC AAGGACCTTT ACCGGCGCAA
ACGTCGCTTT CTCCTACGCC CCGCACTCAG TTCACCCCCA CACCCAGTAC TCGAAAAGGG
TATTACAATC TGGATGTTGT TGGCGATTTT ACTTTGCCAG CGACAAAAAC CATTACGTTT
TGTGGAGCGG GACGAAACCT TCACGTTCAG AAAGATCCTA CGAAAATCTT TCGGCGAGGG
TTCTCAGCCG TTGATCAAAG CAGGATGGTG CCCAACGTCG AAATCTGGAA AGATGGCTTT
CCTGCGAATG GCTGGAAAAG TTCACTTCAG ACCAGTCAGC GGTCGGTCAT TCTCTATCAA
AACTACTTCA GAGATTCGTT TGGTTTGGCC TGGGCACAAA ACAGCGATAA GGCAAATGAG
ACACTCTACC GCGCAGTTCC CAGCGGCAAC GCTGCCGGAG CGGCTCGCCC TATCAATCGA
AATACCCTGT ATCAGGCCTG TGCGGAACTG AGCGGAGGGT GTTTTGGTTT CGGCGATTGC
CCGCCCAGCG GCATGAAAAG CACGTACGGG TTTATTTTCC TGGATATTGA GAACGATGGT
GCCAACATGA CCAATCGGCA GGAACAAGCC AACCTGTACA CCTACATGAT CAAGACGATC
AAGGAAAACG TTAGTCCACA AACGCAGGTT GGGTCTATTG CGCCGGTTTT GCACAACAGC
GTTGGTTATT CAAAAGCTGA CGATTATAAA GCCACTCCCG ACTGGCTCTG GGCAACAACC
GCTCAGCACA CGGCTACCAG CCGCCAGCGA GGTATGCCGA ACGATATAGT TGGCAAATCG
TTCGGTGACT ACGCTGATTT TCAGATGCCC GGTACGTATT ACGCCTTCCC TGACTTTGAC
TACTCAATCC GGCATAACGG AGACAACAGC CGACATTGGC TGGCGTCTTT ACTGGGCGAG
CAGGAAGTCA ACATGAAGTT GTCGCCAAAG AAGCGGATAG CCTGGCAATG GCTGTTCAAT
ACCCAGAGCG AACTTCCGAA CAGCAGTAAA GCGGAACACG CAACTCCCCC CGTCGTGGCC
GAGGGCATGG GCATCTTTTA CTGGTTCACC GGAGCCTACG GCGTATTATT CTGGGATGAT
CATCAGGACC TGGTACCCGA TTCGCCCCCG CCCGCCGATC CGAGCCAGAA AGGACTAGGC
AATGATCGGA ATTATGCCTG CTATGAACAC TATGTTCACG GACTCTGGCG GCTATTCAAG
CATCACGGCG ATTTGTTCAA TGGACGGGAG ACCTATCTTA ATGAATCGAC GGAATGTTCC
TACGACGGTG GGCAAACGTG GTATAAATAC AATGCCAACC AACTCAAAGT GCGTGATTTG
CCCGTTGTTC GTGCCATTGT CAACGGCAAT CAGGTTCTGG TAGCGGCTAC CAAAGCCTAC
GCCCAACCCA ATCAGATGAG CCGGGTCATG ATGCGGTATG TGCAGAACGG CTTTAACTTT
TATACGACCA TTACCCTGAA AGGTGACGAA ATTTACCTGG GCCGAGCTAC CATGAACCGG
TGA
 
Protein sequence
MKLVAVGLAI SLAGAGYWYW QSTGSPAVAA VQLQGPLPAQ TSLSPTPRTQ FTPTPSTRKG 
YYNLDVVGDF TLPATKTITF CGAGRNLHVQ KDPTKIFRRG FSAVDQSRMV PNVEIWKDGF
PANGWKSSLQ TSQRSVILYQ NYFRDSFGLA WAQNSDKANE TLYRAVPSGN AAGAARPINR
NTLYQACAEL SGGCFGFGDC PPSGMKSTYG FIFLDIENDG ANMTNRQEQA NLYTYMIKTI
KENVSPQTQV GSIAPVLHNS VGYSKADDYK ATPDWLWATT AQHTATSRQR GMPNDIVGKS
FGDYADFQMP GTYYAFPDFD YSIRHNGDNS RHWLASLLGE QEVNMKLSPK KRIAWQWLFN
TQSELPNSSK AEHATPPVVA EGMGIFYWFT GAYGVLFWDD HQDLVPDSPP PADPSQKGLG
NDRNYACYEH YVHGLWRLFK HHGDLFNGRE TYLNESTECS YDGGQTWYKY NANQLKVRDL
PVVRAIVNGN QVLVAATKAY AQPNQMSRVM MRYVQNGFNF YTTITLKGDE IYLGRATMNR