Gene Dfer_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0028 
Symbol 
ID8223593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp27720 
End bp29351 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content54% 
IMG OID644927907 
Producthypothetical protein 
Protein accessionYP_003084465 
Protein GI255033844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000206462 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.317386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCACT ATACAAACAT CTACGCAAAG GCATTTTTAA GCATATTATT CAGCATCGCG 
CTGGGTATCT CCGCGGCAAC CGCCCAAAAC TGCCAGCCCG GTTATGTGCT AAACCCCGTC
ACGACCAACA ACCGTATCGA ATGGAATAAA TTCCCTGAAT TCTCACTTCC CTTCAAAATC
CTGTACAGCG GTCCGCGCTT CGGCGACACC CAGTCGCAAC CGTTGAAACA CGGTTTCAGC
CATATTGCGG CATTCAGCGG CCCGGAGCCC GCATCACTCA CCGAGCGCCA ACGGGCAATG
CTTTGGTACG GCGTAGCGAC TTCGAGCGGC GACCAGCCCT GGGGCGACAA TACCCTCCGC
AGCCCGTGGG GCAATGATAC GGCCGCCTAC CGCAGTTTCT GGGACGCTTA CGCCAGCACC
ATCACGCAAG TAGATGTGGT GTGCCTCGAT ATCGAACGCA TGCAGCGCGA AGACCGCGAC
ATCCTCGCAT TGAAATCCAA TACACGGATT CCTCAGAATT ACCGCAACCT TTCGGACGCC
GATTTCCTGG CGACTTACAA AAGAGACATG CGCTGGTGGT ACACCGAAGC CGCCAACCGC
CTCCGCGCCA AGGGCGTAAA AGCCGCCCTC ACGAGTTACA GCGATGTGCC CATCCGCAAC
ACCTGGCTCA ACATCACGGC CAACAGCTGG CAGGACTGGA CCACCAACCC CGCCCGGACG
CATTACCTCA CGCAGGACAA TTCCGGAAAA GTAGGCGGTA GCGTGTACGA CGCAATGGAC
TTTCTTTCGC CATCACCCTA CTATTATTAC GGCTATGACC ACCCCATAGG CAAGGATTAC
CTCTCCTACC TGCTATTCTC GATCGAGGCG AATGCGGCGT GGAGCGACAA GCCGATCATT
CCGTTTGTAT GGCTGCGCGT ACACGACAGT TACGACAAGA ATATCCCCCT GATCACCGAT
TTCATGGCCG AGGCCACAGC GATATTTCCC TTTTTCTCCG GCGCAAAAGG GTTGTGGATT
TGGGAAAACC CGTTTTTATC GGATGAAAGA CAGGAGAATT ATGCTCCCTA TGAGCATTTC
ATTTACGGAC TTTATCGCTT ATCGGAGTTC AAGGACATGC TCGAAGGCGA TTACGACCTG
GTAATCCCGA TGTCGGCGCG GGATCATATG GAACAGCAAA ACCCCGTTTG GCGTGGAATT
GTAAAAAACA ACCATATCCT GATCGCCGCA CAGAACCCCT ACGCCGCCGA CAACGCCACC
ACGTCGATCA CCGTTTCTTA CCAGAACTGG GCCCGAAACA TTACTTTGAA AGGGAAGGAG
GTATTCCTCT GCAAATTCGA CCTGAACGAC ACCGTGAACG GCGTAGAGCC GACGCTGGAC
CTGGTGAATG TGTTTCCCAA CCCCGCTGCG CGGGAGCTGA ACGTTTCGCT GGAAGGCATA
AATGGGGTAA CTGACGTCGA CTTTGCATTG ACTAACAGCA AGGGACAAAT TTTCCTTCAA
CAACCACTCA AAGCATTCGC CGGCCAATCG CGCACAACCA TCCCGCTTCC CCGGCTCGCT
GCTGGCATGT ATTTTGCCCG GTTTACGACC AATAACCGAA CAGTCATTAA AAAAGTGGCG
ATCCTCCAAT AG
 
Protein sequence
MTHYTNIYAK AFLSILFSIA LGISAATAQN CQPGYVLNPV TTNNRIEWNK FPEFSLPFKI 
LYSGPRFGDT QSQPLKHGFS HIAAFSGPEP ASLTERQRAM LWYGVATSSG DQPWGDNTLR
SPWGNDTAAY RSFWDAYAST ITQVDVVCLD IERMQREDRD ILALKSNTRI PQNYRNLSDA
DFLATYKRDM RWWYTEAANR LRAKGVKAAL TSYSDVPIRN TWLNITANSW QDWTTNPART
HYLTQDNSGK VGGSVYDAMD FLSPSPYYYY GYDHPIGKDY LSYLLFSIEA NAAWSDKPII
PFVWLRVHDS YDKNIPLITD FMAEATAIFP FFSGAKGLWI WENPFLSDER QENYAPYEHF
IYGLYRLSEF KDMLEGDYDL VIPMSARDHM EQQNPVWRGI VKNNHILIAA QNPYAADNAT
TSITVSYQNW ARNITLKGKE VFLCKFDLND TVNGVEPTLD LVNVFPNPAA RELNVSLEGI
NGVTDVDFAL TNSKGQIFLQ QPLKAFAGQS RTTIPLPRLA AGMYFARFTT NNRTVIKKVA
ILQ