29 homologs were found in PanDaTox collection
for query gene YPK_2336 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010465  YPK_2336  P2 phage tail completion R family protein  100 
 
 		 155 aa  318  9.999999999999999e-87  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0167277  n/a   
 
 
-
 
NC_010468  EcolC_2768  P2 phage tail completion R family protein  51.82 
 
 		 143 aa  151  4e-36  Escherichia coli ATCC 8739  Bacteria  normal  0.0711494  decreased coverage  0.0000189882 
 
 
-
 
NC_012917  PC1_3181  P2 phage tail completion R family protein  52.94 
 
 		 151 aa  150  5e-36  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0320281  n/a   
 
 
-
 
NC_003295  RSc1929  tail completion-like protein  53.03 
 
 		 144 aa  150  7e-36  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.789532 
 
 
-
 
NC_011205  SeD_A3040  phage tail completion protein R  51.82 
 
 		 143 aa  149  1e-35  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.000372117 
 
 
-
 
NC_009832  Spro_0870  P2 phage tail completion R family protein  43.14 
 
 		 154 aa  149  2e-35  Serratia proteamaculans 568  Bacteria  normal  0.88591  normal  0.060184 
 
 
-
 
NC_012892  B21_00844  hypothetical protein  51.82 
 
 		 143 aa  148  3e-35  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
CP001509  ECD_00838  putative phage tail protein  51.82 
 
 		 143 aa  148  3e-35  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A0934  phage tail completion protein R  51.09 
 
 		 143 aa  148  3e-35  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A4374  P2 phage tail completion protein R  48.34 
 
 		 155 aa  146  1.0000000000000001e-34  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.757447  hitchhiker  0.0000000761798 
 
 
-
 
NC_011149  SeAg_B2857  P2 phage tail completion protein R  51.09 
 
 		 143 aa  145  2.0000000000000003e-34  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_3041  phage tail completion protein GpR  50.33 
 
 		 155 aa  143  8.000000000000001e-34  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  hitchhiker  0.0000422761 
 
 
-
 
NC_010508  Bcenmc03_0197  P2 phage tail completion R family protein  51.15 
 
 		 136 aa  140  5e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.107548 
 
 
-
 
NC_010498  EcSMS35_4334  phage tail completion protein GpR  49.02 
 
 		 155 aa  140  6e-33  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  0.0105939 
 
 
-
 
NC_009997  Sbal195_2906  P2 phage tail completion R family protein  52.24 
 
 		 157 aa  139  9.999999999999999e-33  Shewanella baltica OS195  Bacteria  decreased coverage  0.00159593  normal  0.468907 
 
 
-
 
NC_010086  Bmul_4846  P2 phage tail completion R family protein  50.38 
 
 		 136 aa  139  9.999999999999999e-33  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.833571  normal  1 
 
 
-
 
NC_012560  Avin_37500  hypothetical protein  45.22 
 
 		 176 aa  137  3.9999999999999997e-32  Azotobacter vinelandii DJ  Bacteria  normal  0.982848  n/a   
 
 
-
 
NC_008781  Pnap_3298  P2 phage tail completion R family protein  44.93 
 
 		 142 aa  125  3e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.492486  normal  1 
 
 
-
 
NC_012917  PC1_2650  P2 phage tail completion R family protein  44.78 
 
 		 162 aa  124  5e-28  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0110218  n/a   
 
 
-
 
NC_010717  PXO_01353  P2 phage tail completion protein R (GpR)  46.21 
 
 		 139 aa  124  5e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.465798  n/a   
 
 
-
 
NC_009436  Ent638_3490  P2 phage tail completion R family protein  43.79 
 
 		 155 aa  124  6e-28  Enterobacter sp. 638  Bacteria  normal  1  normal  0.0815668 
 
 
-
 
NC_010002  Daci_2638  P2 phage tail completion R family protein  33.54 
 
 		 169 aa  105  2e-22  Delftia acidovorans SPH-1  Bacteria  normal  0.0419733  hitchhiker  0.0010522 
 
 
-
 
NC_010002  Daci_2604  P2 phage tail completion R family protein  33.54 
 
 		 169 aa  105  2e-22  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.000233223  hitchhiker  0.0000000000000141247 
 
 
-
 
NC_007650  BTH_II1341  fels-2 prophage protein  37.21 
 
 		 138 aa  104  4e-22  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_2089  P2 phage tail completion R family protein  34.84 
 
 		 155 aa  99  2e-20  Dickeya dadantii Ech703  Bacteria  decreased coverage  0.00742517  n/a   
 
 
-
 
NC_007963  Csal_1390  hypothetical protein  38.71 
 
 		 174 aa  93.2  1e-18  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.144748  n/a   
 
 
-
 
NC_012880  Dd703_3824  P2 phage tail completion R family protein  37.78 
 
 		 152 aa  91.3  5e-18  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_1828  P2 phage tail completion R family protein  35.29 
 
 		 153 aa  88.6  3e-17  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00707101  n/a   
 
 
-
 
NC_010658  SbBS512_E1935  P2 phage tail completion protein R (GpR)  35.07 
 
 		 155 aa  86.7  1e-16  Shigella boydii CDC 3083-94  Bacteria  normal  0.817669  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>