Gene Daci_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2604 
Symbol 
ID5748174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2876041 
End bp2876550 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID641297693 
ProductP2 phage tail completion R family protein 
Protein accessionYP_001563627 
Protein GI160898045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000233223 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000141247 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCAAGC CCGCTAGCCT GCGCGACGCG CTCGTCGCTG CCCTGCCCCA GCTGCAACAG 
TCGCCGCGGA ACATCCGTTT CACCATCCAG AGGGGCCGTG TGGTCAACAC GGGCACGCCG
TCCCTTTCCT GGGAATACCG CTACACGCTG AGCCTGGTGA TTGCGGACTT CACCGGCAGC
ATCGATGCCG TGACCGTGCC GCTGCTGGTC TGGGCGCGGC GCCACCAGCC CGACCTGTTC
GACCATGCCG AAAGGCGCGA GCAGGCGATC CGCTTCGACA TTGCGCCTCC TTCCACGGAC
CCTGCAGCCG CCTCGCAGCC GCAGCAGCTC GCCATCGAGA TCGACCTGGT GGAGGCCGTA
CTGGCGCGCC CGCGCGAGGG CAACCCCGGC GCCTTCGACC TGATCTACAA GCCCGAGCCG
CCAGGCCAGC TCGACATTGC GCAGCGCCAG TTGTGGGAGC TGTTCCTGTT CGGCGAGAAG
GTGGCCGAGT GGAACTACGA CCCGCGCTGA
 
Protein sequence
MLKPASLRDA LVAALPQLQQ SPRNIRFTIQ RGRVVNTGTP SLSWEYRYTL SLVIADFTGS 
IDAVTVPLLV WARRHQPDLF DHAERREQAI RFDIAPPSTD PAAASQPQQL AIEIDLVEAV
LARPREGNPG AFDLIYKPEP PGQLDIAQRQ LWELFLFGEK VAEWNYDPR