31 homologs were found in PanDaTox collection
for query gene EcolC_2768 on replicon NC_010468
Organism: Escherichia coli ATCC 8739



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010468  EcolC_2768  P2 phage tail completion R family protein  100 
 
 
143 aa  294  3e-79  Escherichia coli ATCC 8739  Bacteria  normal  0.0711494  decreased coverage  0.0000189882 
 
 
-
 
NC_011205  SeD_A3040  phage tail completion protein R  97.9 
 
 
143 aa  290  4e-78  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.000372117 
 
 
-
 
CP001509  ECD_00838  putative phage tail protein  97.2 
 
 
143 aa  288  2e-77  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00844  hypothetical protein  97.2 
 
 
143 aa  288  2e-77  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0934  phage tail completion protein R  96.5 
 
 
143 aa  286  5.0000000000000004e-77  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2857  P2 phage tail completion protein R  90.21 
 
 
143 aa  265  2e-70  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2336  P2 phage tail completion R family protein  51.82 
 
 
155 aa  151  4e-36  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0167277  n/a   
 
 
-
 
NC_011353  ECH74115_3041  phage tail completion protein GpR  55.56 
 
 
155 aa  132  1.9999999999999998e-30  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.0000422761 
 
 
-
 
NC_003295  RSc1929  tail completion-like protein  48.85 
 
 
144 aa  130  6.999999999999999e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.789532 
 
 
-
 
NC_011080  SNSL254_A4374  P2 phage tail completion protein R  48.15 
 
 
155 aa  127  4.0000000000000003e-29  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.757447  hitchhiker  0.0000000761798 
 
 
-
 
NC_010498  EcSMS35_4334  phage tail completion protein GpR  53.85 
 
 
155 aa  127  5.0000000000000004e-29  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.0105939 
 
 
-
 
NC_012917  PC1_3181  P2 phage tail completion R family protein  47.76 
 
 
151 aa  121  3e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0320281  n/a   
 
 
-
 
NC_010086  Bmul_4846  P2 phage tail completion R family protein  41.22 
 
 
136 aa  116  9.999999999999999e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.833571  normal 
 
 
-
 
NC_010508  Bcenmc03_0197  P2 phage tail completion R family protein  40.46 
 
 
136 aa  115  3e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.107548 
 
 
-
 
NC_008781  Pnap_3298  P2 phage tail completion R family protein  42.86 
 
 
142 aa  113  1.0000000000000001e-24  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.492486  normal 
 
 
-
 
NC_009436  Ent638_3490  P2 phage tail completion R family protein  46.34 
 
 
155 aa  111  4.0000000000000004e-24  Enterobacter sp. 638  Bacteria  normal  normal  0.0815668 
 
 
-
 
NC_009832  Spro_0870  P2 phage tail completion R family protein  39.44 
 
 
154 aa  110  7.000000000000001e-24  Serratia proteamaculans 568  Bacteria  normal  0.88591  normal  0.060184 
 
 
-
 
NC_009997  Sbal195_2906  P2 phage tail completion R family protein  39.85 
 
 
157 aa  109  1.0000000000000001e-23  Shewanella baltica OS195  Bacteria  decreased coverage  0.00159593  normal  0.468907 
 
 
-
 
NC_012917  PC1_2650  P2 phage tail completion R family protein  43.8 
 
 
162 aa  108  3e-23  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0110218  n/a   
 
 
-
 
NC_012560  Avin_37500  hypothetical protein  40.29 
 
 
176 aa  107  4.0000000000000004e-23  Azotobacter vinelandii DJ  Bacteria  normal  0.982848  n/a   
 
 
-
 
NC_010717  PXO_01353  P2 phage tail completion protein R (GpR)  44.54 
 
 
139 aa  106  8.000000000000001e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.465798  n/a   
 
 
-
 
NC_007650  BTH_II1341  fels-2 prophage protein  42.02 
 
 
138 aa  101  3e-21  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2604  P2 phage tail completion R family protein  32.89 
 
 
169 aa  92  2e-18  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.000233223  hitchhiker  0.0000000000000141247 
 
 
-
 
NC_010002  Daci_2638  P2 phage tail completion R family protein  32.89 
 
 
169 aa  92  2e-18  Delftia acidovorans SPH-1  Bacteria  normal  0.0419733  hitchhiker  0.0010522 
 
 
-
 
NC_007963  Csal_1390  hypothetical protein  36.97 
 
 
174 aa  79.3  0.00000000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.144748  n/a   
 
 
-
 
NC_012912  Dd1591_1828  P2 phage tail completion R family protein  36.28 
 
 
153 aa  78.2  0.00000000000003  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00707101  n/a   
 
 
-
 
NC_012880  Dd703_2089  P2 phage tail completion R family protein  35.4 
 
 
155 aa  77  0.00000000000007  Dickeya dadantii Ech703  Bacteria  decreased coverage  0.00742517  n/a   
 
 
-
 
NC_010658  SbBS512_E1935  P2 phage tail completion protein R (GpR)  32.58 
 
 
155 aa  74.3  0.0000000000005  Shigella boydii CDC 3083-94  Bacteria  normal  0.817669  n/a   
 
 
-
 
NC_012880  Dd703_3824  P2 phage tail completion R family protein  35.34 
 
 
152 aa  73.2  0.000000000001  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1467  hypothetical protein  27.52 
 
 
154 aa  48.1  0.00004  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2762  hypothetical protein  27.52 
 
 
154 aa  47.8  0.00005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.470616 
 
 
-
 
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