Gene SeD_A3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3040 
SymbolgpR 
ID6875269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2936110 
End bp2936541 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content54% 
IMG OID642786070 
Productphage tail completion protein R 
Protein accessionYP_002216716 
Protein GI198245018 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.000372117 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACAAAC CACAATCCCT GCGCCACGCC CTCAATAAAG CAGTGCCTTA TGTCCGTAAT 
AACCCGGATA AACTGCATCT GTTTGTGGAT AACGGTTCGC TGGTTGCCAC GGGGGCCAGC 
TCCATGTCAT GGGAGTACCG TTACACCCTG AACGCGGTGA TTGAGGATTT CAGCGGCGAC 
CAGAATCTGC TGATGGCCCC GGTCTTGCTG TGGCTGCGGG ATAACCAGCC CGATGCCATC 
AATAATCCGG CGTTACGGGA AAAGTTATTC ACCTTTGAGG TGGATATTCT GCGCAACGAT 
GTCTGTGATA TCAGCCTTAA CCTGCAACTG ACGGAGCGTG TGCTGGTCAG CACTGACGGC 
AGTGTGTCGA GCGTTGAAGC TGTAGCAGAG CCCGATGAAC CTGAAGAAAT GTGGACGGTG 
AAACGTGGCT GA
 
Protein sequence
MNKPQSLRHA LNKAVPYVRN NPDKLHLFVD NGSLVATGAS SMSWEYRYTL NAVIEDFSGD 
QNLLMAPVLL WLRDNQPDAI NNPALREKLF TFEVDILRND VCDISLNLQL TERVLVSTDG 
SVSSVEAVAE PDEPEEMWTV KRG