6 homologs were found in PanDaTox collection
for query gene Xaut_1568 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_1568  transcriptional regulator, TrmB  100 
 
 
264 aa  534  1e-151  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4640  transcriptional regulator, TrmB  54.92 
 
 
268 aa  279  3e-74  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4460  transcriptional regulator, TrmB  26.56 
 
 
246 aa  87.4  2e-16  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.000000101535 
 
 
-
 
NC_008698  Tpen_1562  transcriptional regulator, TrmB  28.67 
 
 
233 aa  50.4  0.00003  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_1202  transcriptional regulator, TrmB  25 
 
 
262 aa  46.2  0.0006  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.967129 
 
 
-
 
NC_013923  Nmag_3875  transcriptional regulator, TrmB  20.91 
 
 
275 aa  42.4  0.009  Natrialba magadii ATCC 43099  Archaea  normal  0.936215  n/a   
 
 
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