Gene Nmag_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_3875 
Symbol 
ID8826745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013923 
Strand
Start bp271938 
End bp272765 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content56% 
IMG OID 
Producttranscriptional regulator, TrmB 
Protein accessionYP_003481978 
Protein GI289583568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.936215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTGA GGCTGCTATG GCTATTGTTG ACGATGAGCG ATGACAGCCG GGATATGACG 
TCCTATCTGC AGGACGTCGG CCTATCGGAA TACGAATCGA GCGCGTACCT CTCCTTGCTC
GAACACGGCG TCTCGACCGC AAAGCAGGTC GGCTCAGCCG CCGATATTCC CTACTCACGC
GTCTACGACG TACTCGAGTC CCTCCAGAGT TCGGGACTGG TGAAAGTACA ACCGGGGCGG
CCGAAGAAGT ACGGGCCAGT ACCGCCGGAG ACAGCACTCG ATAACGTCAA GCAACGAAAA
CAGGCGGAAC TCGAGAGCGA ACTCGCCTCA ATCGAGAAAG CAGGGGATCT GTTTCTGGAC
GCGTACAACG ACGACACCGG CGGCTATCCA ATTTACGATG AGATCGATAT TTTCTGGTCG
TACGTCGGGA AAAGCGACAT TCTGACCCGG GGTGGGGAGA TGATGGAGAA AGCGGACGAC
CGGATCTACA AGGTTACGAC GGAGAACAGT CTCCAGCGGA TCGTGACGCA GCACAACGAC
GTTCTTCGCC GAAAAAGCGA GGAAGGTGTC TCGATCAAGA TTATCAGCAC CGTTTCAGAT
CTTCCGGAGA CATATATCGA GGCCATCTCC GAGTGGGGTG AGCTTCGTCA CCTCTCTGAC
GTTGAGGGGC GGCTGTATAC CTACGACGAC GACCGGCTGG TACTGGCGTT CAAGAACGAT
AGTCGAGAGC GCTACGTCGC GATTTCGATC GAGAACCAGC AGATGGTCCA GACGGCGTAC
CTGGTTTTCA ATCATCTGTG GGACGTGGCC GAACCGGTGT CGGTATGA
 
Protein sequence
MHLRLLWLLL TMSDDSRDMT SYLQDVGLSE YESSAYLSLL EHGVSTAKQV GSAADIPYSR 
VYDVLESLQS SGLVKVQPGR PKKYGPVPPE TALDNVKQRK QAELESELAS IEKAGDLFLD
AYNDDTGGYP IYDEIDIFWS YVGKSDILTR GGEMMEKADD RIYKVTTENS LQRIVTQHND
VLRRKSEEGV SIKIISTVSD LPETYIEAIS EWGELRHLSD VEGRLYTYDD DRLVLAFKND
SRERYVAISI ENQQMVQTAY LVFNHLWDVA EPVSV